Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 CYP21A1P-202ENST00000354927 1481 ntBASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 AC026471.1-201ENST00000564629 3026 ntBASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
DNAAF1Q8NEP3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DNAAF1Q8NEP3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.27■□□□□ 0.35
DNAAF1Q8NEP3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DNAAF1Q8NEP3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DNAAF1Q8NEP3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.27■□□□□ 0.35
DNAAF1Q8NEP3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DNAAF1Q8NEP3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 AC100791.3-201ENST00000617619 330 ntBASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DNAAF1Q8NEP3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 AC137761.2-201ENST00000561729 223 ntBASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 AC145350.3-201ENST00000569033 163 ntBASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 AC087623.3-201ENST00000607047 1098 ntBASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 AC020763.4-201ENST00000623414 4170 ntBASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.25■□□□□ 0.35
DNAAF1Q8NEP3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms