Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF248Q8NDW4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF248Q8NDW4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNF248Q8NDW4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ZNF248Q8NDW4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF248Q8NDW4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ZNF248Q8NDW4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF248Q8NDW4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF248Q8NDW4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 EGLN1P1-201ENST00000531623 762 ntBASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF248Q8NDW4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 AC027702.1-201ENST00000563810 1770 ntBASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 AC128688.1-201ENST00000487626 519 ntBASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF248Q8NDW4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 AK4P3-201ENST00000418260 669 ntBASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF248Q8NDW4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 HLA-G-202ENST00000376815 851 ntBASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 HLA-G-203ENST00000376818 1127 ntBASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 BX664615.1-201ENST00000443558 458 ntBASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 AC138932.1-201ENST00000534164 6830 ntBASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ZNF248Q8NDW4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF248Q8NDW4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF248Q8NDW4 TSPY14P-201ENST00000303979 915 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms