Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 AC008687.6-201ENST00000596318 630 ntBASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDRT4Q8N9R6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 UNC93B4-201ENST00000505679 747 ntBASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.29■□□□□ 0.52
CDRT4Q8N9R6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 UNC93B5-201ENST00000530315 699 ntBASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDRT4Q8N9R6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDRT4Q8N9R6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDRT4Q8N9R6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.27■□□□□ 0.51
CDRT4Q8N9R6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDRT4Q8N9R6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.27■□□□□ 0.51
CDRT4Q8N9R6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 AL121829.2-201ENST00000620908 328 ntBASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
CDRT4Q8N9R6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms