Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATPAF2Q8N5M1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 AC125437.2-201ENST00000625180 2167 ntBASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 ESRRAP1-201ENST00000400596 1257 ntBASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.17■□□□□ 0.82
ATPAF2Q8N5M1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 AL121829.2-201ENST00000620908 328 ntBASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ATPAF2Q8N5M1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 KRT17P3-201ENST00000420566 1262 ntBASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATPAF2Q8N5M1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.14■□□□□ 0.82
ATPAF2Q8N5M1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 MIR4651-201ENST00000582622 73 ntBASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 AC069544.1-201ENST00000609399 999 ntBASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATPAF2Q8N5M1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms