Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 AC066615.1-201ENST00000640911 628 ntBASIC20.51■□□□□ 0.87
SCML4Q8N228 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SCML4Q8N228 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.51■□□□□ 0.87
SCML4Q8N228 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SCML4Q8N228 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SCML4Q8N228 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCML4Q8N228 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.51■□□□□ 0.87
SCML4Q8N228 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SCML4Q8N228 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.5■□□□□ 0.87
SCML4Q8N228 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 RPS2P55-201ENST00000397318 883 ntBASIC20.5■□□□□ 0.87
SCML4Q8N228 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.5■□□□□ 0.87
SCML4Q8N228 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.5■□□□□ 0.87
SCML4Q8N228 AC107956.1-201ENST00000494359 873 ntBASIC20.5■□□□□ 0.87
SCML4Q8N228 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.5■□□□□ 0.87
SCML4Q8N228 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.5■□□□□ 0.87
SCML4Q8N228 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.5■□□□□ 0.87
SCML4Q8N228 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.5■□□□□ 0.87
SCML4Q8N228 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.5■□□□□ 0.87
SCML4Q8N228 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SCML4Q8N228 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SCML4Q8N228 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.5■□□□□ 0.87
SCML4Q8N228 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.5■□□□□ 0.87
SCML4Q8N228 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCML4Q8N228 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
SCML4Q8N228 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCML4Q8N228 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCML4Q8N228 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SCML4Q8N228 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCML4Q8N228 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCML4Q8N228 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
SCML4Q8N228 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCML4Q8N228 MIR718-201ENST00000390190 70 ntBASIC20.49■□□□□ 0.87
SCML4Q8N228 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SCML4Q8N228 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCML4Q8N228 AF186192.3-201ENST00000583427 947 ntBASIC20.49■□□□□ 0.87
SCML4Q8N228 AC112907.3-201ENST00000577781 2400 ntBASIC20.49■□□□□ 0.87
SCML4Q8N228 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCML4Q8N228 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.49■□□□□ 0.87
SCML4Q8N228 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCML4Q8N228 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCML4Q8N228 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCML4Q8N228 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCML4Q8N228 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.48■□□□□ 0.87
SCML4Q8N228 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCML4Q8N228 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCML4Q8N228 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SCML4Q8N228 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.48■□□□□ 0.87
SCML4Q8N228 AP001412.1-201ENST00000608405 714 ntBASIC20.48■□□□□ 0.87
SCML4Q8N228 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCML4Q8N228 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SCML4Q8N228 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCML4Q8N228 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.48■□□□□ 0.87
SCML4Q8N228 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCML4Q8N228 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCML4Q8N228 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCML4Q8N228 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
SCML4Q8N228 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.47■□□□□ 0.87
SCML4Q8N228 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.47■□□□□ 0.87
SCML4Q8N228 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SCML4Q8N228 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCML4Q8N228 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SCML4Q8N228 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.47■□□□□ 0.87
SCML4Q8N228 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.47■□□□□ 0.87
SCML4Q8N228 Z99916.2-201ENST00000604037 246 ntBASIC20.47■□□□□ 0.87
SCML4Q8N228 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SCML4Q8N228 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCML4Q8N228 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms