Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01561Q8N1V8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01561Q8N1V8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01561Q8N1V8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 AC079598.2-202ENST00000546624 1451 ntBASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 CYP2T3P-201ENST00000601990 817 ntBASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01561Q8N1V8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01561Q8N1V8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms