Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
XRN1Q8IZH2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
XRN1Q8IZH2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC27.49■■□□□ 1.99
XRN1Q8IZH2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
XRN1Q8IZH2 AP003041.3-201ENST00000527151 707 ntBASIC27.48■■□□□ 1.99
XRN1Q8IZH2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC27.48■■□□□ 1.99
XRN1Q8IZH2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC27.48■■□□□ 1.99
XRN1Q8IZH2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC27.48■■□□□ 1.99
XRN1Q8IZH2 PLK5-205ENST00000642079 1969 ntBASIC27.48■■□□□ 1.99
XRN1Q8IZH2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
XRN1Q8IZH2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
XRN1Q8IZH2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
XRN1Q8IZH2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
XRN1Q8IZH2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
XRN1Q8IZH2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
XRN1Q8IZH2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
XRN1Q8IZH2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC27.46■■□□□ 1.99
XRN1Q8IZH2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC27.46■■□□□ 1.99
XRN1Q8IZH2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC27.46■■□□□ 1.99
XRN1Q8IZH2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
XRN1Q8IZH2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
XRN1Q8IZH2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC27.46■■□□□ 1.99
XRN1Q8IZH2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
XRN1Q8IZH2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC27.45■■□□□ 1.99
XRN1Q8IZH2 SPDYE13P-201ENST00000445314 798 ntBASIC27.45■■□□□ 1.99
XRN1Q8IZH2 AC112907.2-201ENST00000448639 330 ntBASIC27.45■■□□□ 1.99
XRN1Q8IZH2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
XRN1Q8IZH2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC27.45■■□□□ 1.99
XRN1Q8IZH2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
XRN1Q8IZH2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
XRN1Q8IZH2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
XRN1Q8IZH2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
XRN1Q8IZH2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC27.45■■□□□ 1.98
XRN1Q8IZH2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
XRN1Q8IZH2 KRT8P8-201ENST00000434750 1448 ntBASIC27.45■■□□□ 1.98
XRN1Q8IZH2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC27.44■■□□□ 1.98
XRN1Q8IZH2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
XRN1Q8IZH2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
XRN1Q8IZH2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
XRN1Q8IZH2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
XRN1Q8IZH2 AC026396.1-201ENST00000419388 421 ntBASIC27.43■■□□□ 1.98
XRN1Q8IZH2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
XRN1Q8IZH2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC27.43■■□□□ 1.98
XRN1Q8IZH2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
XRN1Q8IZH2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC27.43■■□□□ 1.98
XRN1Q8IZH2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
XRN1Q8IZH2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
XRN1Q8IZH2 SPDYE15P-201ENST00000424157 909 ntBASIC27.42■■□□□ 1.98
XRN1Q8IZH2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC27.42■■□□□ 1.98
XRN1Q8IZH2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC27.42■■□□□ 1.98
XRN1Q8IZH2 AL512604.3-201ENST00000569583 964 ntBASIC27.42■■□□□ 1.98
XRN1Q8IZH2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC27.42■■□□□ 1.98
XRN1Q8IZH2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC27.42■■□□□ 1.98
XRN1Q8IZH2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC27.42■■□□□ 1.98
XRN1Q8IZH2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC27.42■■□□□ 1.98
XRN1Q8IZH2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
XRN1Q8IZH2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 VENTXP5-201ENST00000523979 775 ntBASIC27.41■■□□□ 1.98
XRN1Q8IZH2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 HYMAI.1-201ENST00000620949 238 ntBASIC27.41■■□□□ 1.98
XRN1Q8IZH2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
XRN1Q8IZH2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms