Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 AL161938.1-201ENST00000569833 2180 ntBASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD2Q8IV50 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD2Q8IV50 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 TNRC18P3-201ENST00000441896 2691 ntBASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 AC005224.4-201ENST00000583262 1652 ntBASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 AL031598.1-201ENST00000561511 1773 ntBASIC17.23■□□□□ 0.35
LYSMD2Q8IV50 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 AC061975.6-201ENST00000579045 1553 ntBASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD2Q8IV50 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms