Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39BQ5VTQ0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 SMG8-203ENST00000578922 2178 ntBASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 C1QBPP2-201ENST00000528754 825 ntBASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 AC142381.4-202ENST00000563973 229 ntBASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39BQ5VTQ0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 AC239809.2-201ENST00000415381 517 ntBASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39BQ5VTQ0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 RPPH1-201ENST00000516869 333 ntBASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 AL359736.2-201ENST00000621992 437 ntBASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.46■□□□□ 0.87
TTC39BQ5VTQ0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 AC133681.1-201ENST00000465482 601 ntBASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 AC124283.5-201ENST00000624661 1809 ntBASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms