Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SYPL1Q16563 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SYPL1Q16563 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SYPL1Q16563 AC098818.2-201ENST00000564925 2320 ntBASIC18.29■□□□□ 0.52
SYPL1Q16563 AC018445.3-201ENST00000624177 1945 ntBASIC18.29■□□□□ 0.52
SYPL1Q16563 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 Z82202.1-201ENST00000623446 1880 ntBASIC18.29■□□□□ 0.52
SYPL1Q16563 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.29■□□□□ 0.52
SYPL1Q16563 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 GUSBP6-202ENST00000438529 1198 ntBASIC18.29■□□□□ 0.52
SYPL1Q16563 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SYPL1Q16563 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.29■□□□□ 0.52
SYPL1Q16563 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.29■□□□□ 0.52
SYPL1Q16563 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SYPL1Q16563 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SYPL1Q16563 AC116351.2-201ENST00000606540 1585 ntBASIC18.29■□□□□ 0.52
SYPL1Q16563 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYPL1Q16563 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.28■□□□□ 0.52
SYPL1Q16563 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.28■□□□□ 0.52
SYPL1Q16563 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
SYPL1Q16563 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYPL1Q16563 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SYPL1Q16563 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SYPL1Q16563 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYPL1Q16563 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SYPL1Q16563 AL390719.1-204ENST00000412397 1219 ntBASIC18.28■□□□□ 0.52
SYPL1Q16563 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYPL1Q16563 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.28■□□□□ 0.52
SYPL1Q16563 AC005829.2-201ENST00000571422 1056 ntBASIC18.28■□□□□ 0.52
SYPL1Q16563 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYPL1Q16563 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SYPL1Q16563 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SYPL1Q16563 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYPL1Q16563 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYPL1Q16563 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SYPL1Q16563 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYPL1Q16563 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.27■□□□□ 0.52
SYPL1Q16563 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SYPL1Q16563 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.27■□□□□ 0.52
SYPL1Q16563 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYPL1Q16563 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYPL1Q16563 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.27■□□□□ 0.52
SYPL1Q16563 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.27■□□□□ 0.52
SYPL1Q16563 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYPL1Q16563 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYPL1Q16563 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYPL1Q16563 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.27■□□□□ 0.52
SYPL1Q16563 SLC29A4P1-201ENST00000398760 971 ntBASIC18.27■□□□□ 0.52
SYPL1Q16563 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.27■□□□□ 0.52
SYPL1Q16563 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.27■□□□□ 0.52
SYPL1Q16563 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.27■□□□□ 0.52
SYPL1Q16563 NCF1B-203ENST00000435988 1254 ntBASIC18.27■□□□□ 0.52
SYPL1Q16563 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.27■□□□□ 0.52
SYPL1Q16563 AC091874.3-201ENST00000512672 1195 ntBASIC18.27■□□□□ 0.52
SYPL1Q16563 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.27■□□□□ 0.52
SYPL1Q16563 AC092118.2-201ENST00000613495 667 ntBASIC18.27■□□□□ 0.52
SYPL1Q16563 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SYPL1Q16563 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SYPL1Q16563 AP000974.1-201ENST00000623909 2387 ntBASIC18.27■□□□□ 0.52
SYPL1Q16563 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SYPL1Q16563 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYPL1Q16563 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYPL1Q16563 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SYPL1Q16563 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYPL1Q16563 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYPL1Q16563 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SYPL1Q16563 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.26■□□□□ 0.51
SYPL1Q16563 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SYPL1Q16563 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SYPL1Q16563 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYPL1Q16563 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYPL1Q16563 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SYPL1Q16563 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYPL1Q16563 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYPL1Q16563 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYPL1Q16563 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.26■□□□□ 0.51
SYPL1Q16563 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYPL1Q16563 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.26■□□□□ 0.51
SYPL1Q16563 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SYPL1Q16563 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.26■□□□□ 0.51
SYPL1Q16563 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYPL1Q16563 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYPL1Q16563 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.26■□□□□ 0.51
SYPL1Q16563 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.26■□□□□ 0.51
SYPL1Q16563 TSPY6P-201ENST00000448518 926 ntBASIC18.26■□□□□ 0.51
SYPL1Q16563 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYPL1Q16563 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.26■□□□□ 0.51
SYPL1Q16563 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms