Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.73■□□□□ 0.59
PHC1P78364 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.73■□□□□ 0.59
PHC1P78364 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PHC1P78364 AL512625.2-201ENST00000417533 625 ntBASIC18.73■□□□□ 0.59
PHC1P78364 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.73■□□□□ 0.59
PHC1P78364 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.73■□□□□ 0.59
PHC1P78364 AC023632.3-201ENST00000521633 145 ntBASIC18.73■□□□□ 0.59
PHC1P78364 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 AL032819.2-201ENST00000624543 2162 ntBASIC18.73■□□□□ 0.59
PHC1P78364 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 PHGDH-210ENST00000641115 1638 ntBASIC18.73■□□□□ 0.59
PHC1P78364 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHC1P78364 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.73■□□□□ 0.59
PHC1P78364 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.73■□□□□ 0.59
PHC1P78364 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PHC1P78364 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHC1P78364 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.72■□□□□ 0.59
PHC1P78364 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHC1P78364 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHC1P78364 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHC1P78364 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.72■□□□□ 0.59
PHC1P78364 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHC1P78364 HLA-G-202ENST00000376815 851 ntBASIC18.72■□□□□ 0.59
PHC1P78364 HLA-G-203ENST00000376818 1127 ntBASIC18.72■□□□□ 0.59
PHC1P78364 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHC1P78364 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.72■□□□□ 0.59
PHC1P78364 AC022517.1-201ENST00000592429 346 ntBASIC18.72■□□□□ 0.59
PHC1P78364 AL589743.5-201ENST00000616611 1050 ntBASIC18.72■□□□□ 0.59
PHC1P78364 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.72■□□□□ 0.59
PHC1P78364 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHC1P78364 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.72■□□□□ 0.59
PHC1P78364 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PHC1P78364 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHC1P78364 AC004408.2-201ENST00000623613 2777 ntBASIC18.71■□□□□ 0.59
PHC1P78364 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHC1P78364 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHC1P78364 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PHC1P78364 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHC1P78364 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHC1P78364 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.71■□□□□ 0.59
PHC1P78364 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PHC1P78364 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHC1P78364 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHC1P78364 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHC1P78364 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PHC1P78364 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PHC1P78364 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PHC1P78364 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.7■□□□□ 0.58
PHC1P78364 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.7■□□□□ 0.58
PHC1P78364 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PHC1P78364 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PHC1P78364 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.7■□□□□ 0.58
PHC1P78364 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PHC1P78364 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PHC1P78364 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.7■□□□□ 0.58
PHC1P78364 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PHC1P78364 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.7■□□□□ 0.58
PHC1P78364 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.7■□□□□ 0.58
PHC1P78364 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHC1P78364 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PHC1P78364 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PHC1P78364 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PHC1P78364 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.69■□□□□ 0.58
PHC1P78364 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.69■□□□□ 0.58
PHC1P78364 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.69■□□□□ 0.58
PHC1P78364 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.69■□□□□ 0.58
PHC1P78364 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PHC1P78364 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.69■□□□□ 0.58
PHC1P78364 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.69■□□□□ 0.58
PHC1P78364 LETM1P2-201ENST00000597330 2178 ntBASIC18.69■□□□□ 0.58
PHC1P78364 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.69■□□□□ 0.58
PHC1P78364 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHC1P78364 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms