Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
WNT3P56703 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
WNT3P56703 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
WNT3P56703 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 AC116351.2-201ENST00000606540 1585 ntBASIC18.6■□□□□ 0.57
WNT3P56703 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.6■□□□□ 0.57
WNT3P56703 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 MIR4758-201ENST00000577688 71 ntBASIC18.6■□□□□ 0.57
WNT3P56703 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.6■□□□□ 0.57
WNT3P56703 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
WNT3P56703 RNF165-205ENST00000588679 2904 ntBASIC18.6■□□□□ 0.57
WNT3P56703 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
WNT3P56703 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.59■□□□□ 0.57
WNT3P56703 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
WNT3P56703 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.59■□□□□ 0.57
WNT3P56703 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.59■□□□□ 0.57
WNT3P56703 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.59■□□□□ 0.57
WNT3P56703 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.59■□□□□ 0.57
WNT3P56703 RNA5SP413-201ENST00000516373 109 ntBASIC18.59■□□□□ 0.57
WNT3P56703 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.59■□□□□ 0.57
WNT3P56703 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.59■□□□□ 0.57
WNT3P56703 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
WNT3P56703 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.59■□□□□ 0.57
WNT3P56703 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.59■□□□□ 0.57
WNT3P56703 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3P56703 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3P56703 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.58■□□□□ 0.57
WNT3P56703 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3P56703 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.58■□□□□ 0.57
WNT3P56703 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3P56703 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3P56703 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3P56703 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3P56703 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3P56703 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3P56703 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
WNT3P56703 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
WNT3P56703 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.58■□□□□ 0.56
WNT3P56703 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.58■□□□□ 0.56
WNT3P56703 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
WNT3P56703 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.58■□□□□ 0.56
WNT3P56703 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3P56703 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3P56703 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3P56703 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3P56703 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3P56703 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
WNT3P56703 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
WNT3P56703 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.58■□□□□ 0.56
WNT3P56703 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3P56703 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.58■□□□□ 0.56
WNT3P56703 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
WNT3P56703 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.57■□□□□ 0.56
WNT3P56703 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.57■□□□□ 0.56
WNT3P56703 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.57■□□□□ 0.56
WNT3P56703 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.57■□□□□ 0.56
WNT3P56703 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3P56703 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms