Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPAP53621 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
COPAP53621 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.28■□□□□ 0.84
COPAP53621 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPAP53621 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.28■□□□□ 0.84
COPAP53621 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.28■□□□□ 0.84
COPAP53621 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.28■□□□□ 0.84
COPAP53621 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.28■□□□□ 0.84
COPAP53621 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COPAP53621 AC073912.3-201ENST00000624414 853 ntBASIC20.28■□□□□ 0.84
COPAP53621 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.28■□□□□ 0.84
COPAP53621 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPAP53621 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COPAP53621 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COPAP53621 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPAP53621 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.27■□□□□ 0.84
COPAP53621 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
COPAP53621 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.27■□□□□ 0.84
COPAP53621 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPAP53621 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.27■□□□□ 0.84
COPAP53621 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.27■□□□□ 0.84
COPAP53621 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.27■□□□□ 0.84
COPAP53621 PRKY-204ENST00000533551 1019 ntBASIC20.27■□□□□ 0.84
COPAP53621 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
COPAP53621 AL121829.2-201ENST00000620908 328 ntBASIC20.27■□□□□ 0.84
COPAP53621 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPAP53621 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPAP53621 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPAP53621 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COPAP53621 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.26■□□□□ 0.83
COPAP53621 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COPAP53621 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.26■□□□□ 0.83
COPAP53621 RARRES2P10-201ENST00000564312 460 ntBASIC20.26■□□□□ 0.83
COPAP53621 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COPAP53621 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.26■□□□□ 0.83
COPAP53621 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.26■□□□□ 0.83
COPAP53621 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COPAP53621 AL135905.2-201ENST00000584934 1404 ntBASIC20.26■□□□□ 0.83
COPAP53621 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.26■□□□□ 0.83
COPAP53621 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPAP53621 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPAP53621 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPAP53621 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPAP53621 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.25■□□□□ 0.83
COPAP53621 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
COPAP53621 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COPAP53621 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPAP53621 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.25■□□□□ 0.83
COPAP53621 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.25■□□□□ 0.83
COPAP53621 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPAP53621 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
COPAP53621 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COPAP53621 AC113410.3-201ENST00000623366 203 ntBASIC20.25■□□□□ 0.83
COPAP53621 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPAP53621 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.25■□□□□ 0.83
COPAP53621 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.25■□□□□ 0.83
COPAP53621 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.25■□□□□ 0.83
COPAP53621 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPAP53621 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPAP53621 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPAP53621 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPAP53621 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COPAP53621 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COPAP53621 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
COPAP53621 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.24■□□□□ 0.83
COPAP53621 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COPAP53621 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.24■□□□□ 0.83
COPAP53621 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPAP53621 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.24■□□□□ 0.83
COPAP53621 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPAP53621 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COPAP53621 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COPAP53621 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.24■□□□□ 0.83
COPAP53621 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.24■□□□□ 0.83
COPAP53621 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COPAP53621 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.24■□□□□ 0.83
COPAP53621 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COPAP53621 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.24■□□□□ 0.83
COPAP53621 AP001412.1-201ENST00000608405 714 ntBASIC20.24■□□□□ 0.83
COPAP53621 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
COPAP53621 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms