Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
RABIFP47224 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.32■□□□□ 0.68
RABIFP47224 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RABIFP47224 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RABIFP47224 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RABIFP47224 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RABIFP47224 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RABIFP47224 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.31■□□□□ 0.68
RABIFP47224 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.31■□□□□ 0.68
RABIFP47224 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.31■□□□□ 0.68
RABIFP47224 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RABIFP47224 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.31■□□□□ 0.68
RABIFP47224 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
RABIFP47224 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RABIFP47224 LINC01568-207ENST00000641790 1380 ntBASIC19.31■□□□□ 0.68
RABIFP47224 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RABIFP47224 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RABIFP47224 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 AC005363.2-201ENST00000618631 242 ntBASIC19.3■□□□□ 0.68
RABIFP47224 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 HLA-A-209ENST00000638375 975 ntBASIC19.3■□□□□ 0.68
RABIFP47224 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.3■□□□□ 0.68
RABIFP47224 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.3■□□□□ 0.68
RABIFP47224 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.3■□□□□ 0.68
RABIFP47224 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RABIFP47224 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.29■□□□□ 0.68
RABIFP47224 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 KRT8P8-201ENST00000434750 1448 ntBASIC19.29■□□□□ 0.68
RABIFP47224 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RABIFP47224 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RABIFP47224 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.29■□□□□ 0.68
RABIFP47224 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.29■□□□□ 0.68
RABIFP47224 AP005242.2-201ENST00000580065 1175 ntBASIC19.29■□□□□ 0.68
RABIFP47224 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.29■□□□□ 0.68
RABIFP47224 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.29■□□□□ 0.68
RABIFP47224 AC010331.1-201ENST00000611423 582 ntBASIC19.29■□□□□ 0.68
RABIFP47224 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.29■□□□□ 0.68
RABIFP47224 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.29■□□□□ 0.68
RABIFP47224 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RABIFP47224 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RABIFP47224 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RABIFP47224 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
RABIFP47224 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.28■□□□□ 0.68
RABIFP47224 KRT18P22-201ENST00000402024 1347 ntBASIC19.28■□□□□ 0.68
RABIFP47224 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RABIFP47224 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RABIFP47224 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RABIFP47224 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RABIFP47224 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.28■□□□□ 0.68
RABIFP47224 AC011506.1-201ENST00000474329 610 ntBASIC19.28■□□□□ 0.68
RABIFP47224 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.28■□□□□ 0.68
RABIFP47224 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.28■□□□□ 0.68
RABIFP47224 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.28■□□□□ 0.68
RABIFP47224 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.28■□□□□ 0.68
RABIFP47224 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RABIFP47224 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RABIFP47224 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms