Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.44■□□□□ 0.86
MMP13P45452 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.44■□□□□ 0.86
MMP13P45452 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.44■□□□□ 0.86
MMP13P45452 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.44■□□□□ 0.86
MMP13P45452 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
MMP13P45452 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
MMP13P45452 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MMP13P45452 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP13P45452 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP13P45452 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP13P45452 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP13P45452 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP13P45452 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP13P45452 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.42■□□□□ 0.86
MMP13P45452 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.42■□□□□ 0.86
MMP13P45452 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.42■□□□□ 0.86
MMP13P45452 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 AC023632.3-201ENST00000521633 145 ntBASIC20.42■□□□□ 0.86
MMP13P45452 AL031963.3-201ENST00000606441 850 ntBASIC20.42■□□□□ 0.86
MMP13P45452 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
MMP13P45452 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP13P45452 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MMP13P45452 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP13P45452 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MMP13P45452 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP13P45452 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP13P45452 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP13P45452 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 TREX1-205ENST00000625293 1783 ntBASIC20.41■□□□□ 0.86
MMP13P45452 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MMP13P45452 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MMP13P45452 KRT8P20-201ENST00000423953 1409 ntBASIC20.41■□□□□ 0.86
MMP13P45452 KRT8P17-201ENST00000453110 1448 ntBASIC20.41■□□□□ 0.86
MMP13P45452 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MMP13P45452 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.41■□□□□ 0.86
MMP13P45452 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP13P45452 AC093503.3-201ENST00000624917 2352 ntBASIC20.41■□□□□ 0.86
MMP13P45452 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.4■□□□□ 0.86
MMP13P45452 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP13P45452 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP13P45452 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP13P45452 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
MMP13P45452 HLA-G-202ENST00000376815 851 ntBASIC20.4■□□□□ 0.86
MMP13P45452 HLA-G-203ENST00000376818 1127 ntBASIC20.4■□□□□ 0.86
MMP13P45452 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP13P45452 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.4■□□□□ 0.86
MMP13P45452 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
MMP13P45452 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MMP13P45452 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.4■□□□□ 0.86
MMP13P45452 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.4■□□□□ 0.86
MMP13P45452 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.4■□□□□ 0.86
MMP13P45452 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.4■□□□□ 0.86
MMP13P45452 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.4■□□□□ 0.86
MMP13P45452 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP13P45452 AL691432.2-201ENST00000607222 2038 ntBASIC20.4■□□□□ 0.86
MMP13P45452 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MMP13P45452 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.4■□□□□ 0.86
MMP13P45452 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP13P45452 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.86
MMP13P45452 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms