Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GDNFP39905 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.09■□□□□ 0.33
GDNFP39905 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.09■□□□□ 0.33
GDNFP39905 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.09■□□□□ 0.33
GDNFP39905 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.09■□□□□ 0.33
GDNFP39905 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GDNFP39905 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
GDNFP39905 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
GDNFP39905 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
GDNFP39905 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GDNFP39905 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.09■□□□□ 0.33
GDNFP39905 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
GDNFP39905 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
GDNFP39905 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GDNFP39905 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GDNFP39905 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GDNFP39905 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GDNFP39905 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GDNFP39905 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GDNFP39905 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GDNFP39905 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GDNFP39905 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.08■□□□□ 0.33
GDNFP39905 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GDNFP39905 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GDNFP39905 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.08■□□□□ 0.32
GDNFP39905 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.08■□□□□ 0.32
GDNFP39905 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.08■□□□□ 0.32
GDNFP39905 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.08■□□□□ 0.32
GDNFP39905 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.08■□□□□ 0.32
GDNFP39905 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.08■□□□□ 0.32
GDNFP39905 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.08■□□□□ 0.32
GDNFP39905 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.08■□□□□ 0.32
GDNFP39905 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.08■□□□□ 0.32
GDNFP39905 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.08■□□□□ 0.32
GDNFP39905 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.08■□□□□ 0.32
GDNFP39905 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 MIR5787-201ENST00000611784 55 ntBASIC17.08■□□□□ 0.32
GDNFP39905 AC120498.10-201ENST00000621827 505 ntBASIC17.08■□□□□ 0.32
GDNFP39905 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.08■□□□□ 0.32
GDNFP39905 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GDNFP39905 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GDNFP39905 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.07■□□□□ 0.32
GDNFP39905 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.07■□□□□ 0.32
GDNFP39905 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
GDNFP39905 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.07■□□□□ 0.32
GDNFP39905 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GDNFP39905 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.07■□□□□ 0.32
GDNFP39905 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.07■□□□□ 0.32
GDNFP39905 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
GDNFP39905 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.07■□□□□ 0.32
GDNFP39905 KRT18P20-201ENST00000548986 1279 ntBASIC17.07■□□□□ 0.32
GDNFP39905 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.07■□□□□ 0.32
GDNFP39905 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.07■□□□□ 0.32
GDNFP39905 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.07■□□□□ 0.32
GDNFP39905 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GDNFP39905 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.07■□□□□ 0.32
GDNFP39905 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms