Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL1P22362 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCL1P22362 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL1P22362 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCL1P22362 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CCL1P22362 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL1P22362 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL1P22362 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCL1P22362 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.93■□□□□ 0.3
CCL1P22362 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL1P22362 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.93■□□□□ 0.3
CCL1P22362 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL1P22362 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCL1P22362 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 AL137784.2-201ENST00000607332 1000 ntBASIC16.93■□□□□ 0.3
CCL1P22362 AC092118.2-201ENST00000613495 667 ntBASIC16.93■□□□□ 0.3
CCL1P22362 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL1P22362 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCL1P22362 LINC01465-201ENST00000408887 1940 ntBASIC16.93■□□□□ 0.3
CCL1P22362 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CCL1P22362 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL1P22362 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCL1P22362 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL1P22362 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL1P22362 AL020996.1-203ENST00000536896 2307 ntBASIC16.92■□□□□ 0.3
CCL1P22362 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL1P22362 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL1P22362 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL1P22362 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL1P22362 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCL1P22362 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL1P22362 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL1P22362 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL1P22362 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCL1P22362 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL1P22362 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.92■□□□□ 0.3
CCL1P22362 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.92■□□□□ 0.3
CCL1P22362 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL1P22362 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL1P22362 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL1P22362 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCL1P22362 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL1P22362 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL1P22362 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL1P22362 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL1P22362 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCL1P22362 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL1P22362 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CCL1P22362 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL1P22362 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL1P22362 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCL1P22362 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL1P22362 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCL1P22362 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL1P22362 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL1P22362 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL1P22362 DUSP5P2-201ENST00000426873 1033 ntBASIC16.91■□□□□ 0.3
CCL1P22362 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL1P22362 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCL1P22362 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.91■□□□□ 0.3
CCL1P22362 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL1P22362 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL1P22362 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL1P22362 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL1P22362 AL121832.2-201ENST00000610979 668 ntBASIC16.91■□□□□ 0.3
CCL1P22362 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCL1P22362 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL1P22362 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCL1P22362 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCL1P22362 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL1P22362 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms