Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MSR1P21757 PNMA6B-201ENST00000538162 1200 ntBASIC17.38■□□□□ 0.37
MSR1P21757 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.38■□□□□ 0.37
MSR1P21757 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.38■□□□□ 0.37
MSR1P21757 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MSR1P21757 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MSR1P21757 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MSR1P21757 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSR1P21757 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.38■□□□□ 0.37
MSR1P21757 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.37■□□□□ 0.37
MSR1P21757 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.37■□□□□ 0.37
MSR1P21757 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.37■□□□□ 0.37
MSR1P21757 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.37■□□□□ 0.37
MSR1P21757 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.37■□□□□ 0.37
MSR1P21757 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.37■□□□□ 0.37
MSR1P21757 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.37■□□□□ 0.37
MSR1P21757 AL158211.5-201ENST00000623583 2518 ntBASIC17.37■□□□□ 0.37
MSR1P21757 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.37■□□□□ 0.37
MSR1P21757 HLA-L-209ENST00000420110 1011 ntBASIC17.37■□□□□ 0.37
MSR1P21757 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.37■□□□□ 0.37
MSR1P21757 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.37■□□□□ 0.37
MSR1P21757 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.37■□□□□ 0.37
MSR1P21757 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.37■□□□□ 0.37
MSR1P21757 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
MSR1P21757 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSR1P21757 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.37■□□□□ 0.37
MSR1P21757 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MSR1P21757 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.36■□□□□ 0.37
MSR1P21757 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.36■□□□□ 0.37
MSR1P21757 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.36■□□□□ 0.37
MSR1P21757 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.36■□□□□ 0.37
MSR1P21757 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.36■□□□□ 0.37
MSR1P21757 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.36■□□□□ 0.37
MSR1P21757 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.36■□□□□ 0.37
MSR1P21757 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MSR1P21757 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.36■□□□□ 0.37
MSR1P21757 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSR1P21757 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MSR1P21757 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSR1P21757 TREX1-205ENST00000625293 1783 ntBASIC17.35■□□□□ 0.37
MSR1P21757 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.35■□□□□ 0.37
MSR1P21757 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSR1P21757 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSR1P21757 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.35■□□□□ 0.37
MSR1P21757 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.35■□□□□ 0.37
MSR1P21757 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.35■□□□□ 0.37
MSR1P21757 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.35■□□□□ 0.37
MSR1P21757 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.35■□□□□ 0.37
MSR1P21757 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.35■□□□□ 0.37
MSR1P21757 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.35■□□□□ 0.37
MSR1P21757 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.35■□□□□ 0.37
MSR1P21757 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.35■□□□□ 0.37
MSR1P21757 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
MSR1P21757 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MSR1P21757 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.35■□□□□ 0.37
MSR1P21757 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.35■□□□□ 0.37
MSR1P21757 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSR1P21757 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSR1P21757 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MSR1P21757 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MSR1P21757 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSR1P21757 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MSR1P21757 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSR1P21757 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
MSR1P21757 ID1-201ENST00000376105 1233 ntBASIC17.34■□□□□ 0.37
MSR1P21757 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSR1P21757 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSR1P21757 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.34■□□□□ 0.37
MSR1P21757 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSR1P21757 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.34■□□□□ 0.37
MSR1P21757 RPS2P52-201ENST00000469610 820 ntBASIC17.34■□□□□ 0.37
MSR1P21757 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.34■□□□□ 0.37
MSR1P21757 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms