Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN3P20807 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CAPN3P20807 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CAPN3P20807 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN3P20807 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CAPN3P20807 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPN3P20807 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN3P20807 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN3P20807 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CAPN3P20807 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN3P20807 AC010536.3-201ENST00000620306 533 ntBASIC18.9■□□□□ 0.62
CAPN3P20807 AC133041.1-202ENST00000642053 222 ntBASIC18.9■□□□□ 0.62
CAPN3P20807 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CAPN3P20807 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 KRT16P6-202ENST00000425692 1426 ntBASIC18.9■□□□□ 0.62
CAPN3P20807 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPN3P20807 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CAPN3P20807 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CAPN3P20807 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN3P20807 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CAPN3P20807 AP001271.2-201ENST00000624018 1556 ntBASIC18.89■□□□□ 0.62
CAPN3P20807 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CAPN3P20807 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.89■□□□□ 0.61
CAPN3P20807 AC073210.2-201ENST00000430369 194 ntBASIC18.89■□□□□ 0.61
CAPN3P20807 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.89■□□□□ 0.61
CAPN3P20807 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN3P20807 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN3P20807 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPN3P20807 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPN3P20807 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN3P20807 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPN3P20807 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPN3P20807 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CAPN3P20807 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN3P20807 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CAPN3P20807 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN3P20807 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPN3P20807 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CAPN3P20807 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CAPN3P20807 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CAPN3P20807 AC007322.1-201ENST00000426983 750 ntBASIC18.88■□□□□ 0.61
CAPN3P20807 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN3P20807 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPN3P20807 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CAPN3P20807 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.88■□□□□ 0.61
CAPN3P20807 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN3P20807 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN3P20807 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CAPN3P20807 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CAPN3P20807 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN3P20807 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms