Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
SOX30O94993 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX30O94993 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SOX30O94993 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SOX30O94993 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 TFP1-202ENST00000475455 1573 ntBASIC18.3■□□□□ 0.52
SOX30O94993 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.3■□□□□ 0.52
SOX30O94993 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SOX30O94993 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SOX30O94993 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX30O94993 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX30O94993 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX30O94993 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX30O94993 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SOX30O94993 PNMA6B-201ENST00000538162 1200 ntBASIC18.3■□□□□ 0.52
SOX30O94993 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.3■□□□□ 0.52
SOX30O94993 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX30O94993 AL121906.2-201ENST00000621597 723 ntBASIC18.3■□□□□ 0.52
SOX30O94993 TMEM191A-211ENST00000637163 1067 ntBASIC18.3■□□□□ 0.52
SOX30O94993 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX30O94993 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SOX30O94993 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX30O94993 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX30O94993 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SOX30O94993 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX30O94993 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SOX30O94993 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX30O94993 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX30O94993 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX30O94993 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX30O94993 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX30O94993 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX30O94993 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX30O94993 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX30O94993 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX30O94993 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SOX30O94993 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX30O94993 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX30O94993 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.29■□□□□ 0.52
SOX30O94993 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.29■□□□□ 0.52
SOX30O94993 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX30O94993 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SOX30O94993 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX30O94993 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX30O94993 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX30O94993 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX30O94993 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX30O94993 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.28■□□□□ 0.52
SOX30O94993 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SOX30O94993 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX30O94993 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX30O94993 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX30O94993 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX30O94993 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX30O94993 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX30O94993 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SOX30O94993 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX30O94993 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX30O94993 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX30O94993 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX30O94993 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SOX30O94993 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX30O94993 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX30O94993 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX30O94993 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX30O94993 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SOX30O94993 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX30O94993 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX30O94993 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX30O94993 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX30O94993 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX30O94993 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.27■□□□□ 0.52
SOX30O94993 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SOX30O94993 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.27■□□□□ 0.52
SOX30O94993 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.27■□□□□ 0.52
SOX30O94993 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.27■□□□□ 0.52
SOX30O94993 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX30O94993 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX30O94993 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX30O94993 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX30O94993 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX30O94993 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SOX30O94993 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX30O94993 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms