Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SNCGO76070 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNCGO76070 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
SNCGO76070 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SNCGO76070 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCGO76070 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.27□□□□□ -0.28
SNCGO76070 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCGO76070 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.27□□□□□ -0.28
SNCGO76070 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.27□□□□□ -0.28
SNCGO76070 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCGO76070 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCGO76070 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCGO76070 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SNCGO76070 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SNCGO76070 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.27□□□□□ -0.28
SNCGO76070 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNCGO76070 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.27□□□□□ -0.28
SNCGO76070 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
SNCGO76070 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SNCGO76070 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC13.27□□□□□ -0.29
SNCGO76070 SRP68-213ENST00000629930 165 ntTSL 5 BASIC13.27□□□□□ -0.29
SNCGO76070 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 AC099398.1-201ENST00000567919 2776 ntBASIC13.27□□□□□ -0.29
SNCGO76070 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SNCGO76070 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
SNCGO76070 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.27□□□□□ -0.29
SNCGO76070 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SNCGO76070 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.27□□□□□ -0.29
SNCGO76070 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.27□□□□□ -0.29
SNCGO76070 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.27□□□□□ -0.29
SNCGO76070 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNCGO76070 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SNCGO76070 AC112907.3-201ENST00000577781 2400 ntBASIC13.27□□□□□ -0.29
SNCGO76070 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SNCGO76070 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 KRT18P24-201ENST00000344739 1156 ntBASIC13.26□□□□□ -0.29
SNCGO76070 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SNCGO76070 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCGO76070 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SNCGO76070 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 AC139795.1-202ENST00000500444 432 ntBASIC13.26□□□□□ -0.29
SNCGO76070 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCGO76070 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.26□□□□□ -0.29
SNCGO76070 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 AC087239.1-201ENST00000622671 572 ntBASIC13.26□□□□□ -0.29
SNCGO76070 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SNCGO76070 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC13.26□□□□□ -0.29
SNCGO76070 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.26□□□□□ -0.29
SNCGO76070 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SNCGO76070 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCGO76070 AC139713.2-201ENST00000641328 2723 ntBASIC13.26□□□□□ -0.29
SNCGO76070 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCGO76070 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.26□□□□□ -0.29
SNCGO76070 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SNCGO76070 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCGO76070 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 AC121338.2-201ENST00000622535 1744 ntBASIC13.25□□□□□ -0.29
SNCGO76070 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SNCGO76070 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SNCGO76070 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SNCGO76070 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.25□□□□□ -0.29
SNCGO76070 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC13.25□□□□□ -0.29
SNCGO76070 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.25□□□□□ -0.29
SNCGO76070 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SNCGO76070 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCGO76070 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms