Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MSI1O43347 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.47■□□□□ 0.87
MSI1O43347 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 AP001271.2-201ENST00000624018 1556 ntBASIC20.46■□□□□ 0.87
MSI1O43347 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.46■□□□□ 0.87
MSI1O43347 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.46■□□□□ 0.87
MSI1O43347 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.46■□□□□ 0.87
MSI1O43347 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MSI1O43347 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
MSI1O43347 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MSI1O43347 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MSI1O43347 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.46■□□□□ 0.87
MSI1O43347 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.46■□□□□ 0.87
MSI1O43347 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
MSI1O43347 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MSI1O43347 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MSI1O43347 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MSI1O43347 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.45■□□□□ 0.86
MSI1O43347 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.45■□□□□ 0.86
MSI1O43347 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
MSI1O43347 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
MSI1O43347 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.45■□□□□ 0.86
MSI1O43347 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MSI1O43347 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.45■□□□□ 0.86
MSI1O43347 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MSI1O43347 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
MSI1O43347 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.45■□□□□ 0.86
MSI1O43347 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.45■□□□□ 0.86
MSI1O43347 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MSI1O43347 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSI1O43347 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
MSI1O43347 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.44■□□□□ 0.86
MSI1O43347 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
MSI1O43347 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.44■□□□□ 0.86
MSI1O43347 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 YBX1P10-201ENST00000444752 975 ntBASIC20.44■□□□□ 0.86
MSI1O43347 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
MSI1O43347 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.44■□□□□ 0.86
MSI1O43347 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.44■□□□□ 0.86
MSI1O43347 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
MSI1O43347 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MSI1O43347 AC004264.1-201ENST00000608354 794 ntBASIC20.44■□□□□ 0.86
MSI1O43347 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.44■□□□□ 0.86
MSI1O43347 HTR7P1-201ENST00000538670 1336 ntBASIC20.44■□□□□ 0.86
MSI1O43347 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSI1O43347 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MSI1O43347 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.43■□□□□ 0.86
MSI1O43347 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MSI1O43347 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MSI1O43347 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MSI1O43347 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MSI1O43347 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MSI1O43347 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
MSI1O43347 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MSI1O43347 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MSI1O43347 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.43■□□□□ 0.86
MSI1O43347 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.43■□□□□ 0.86
MSI1O43347 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.43■□□□□ 0.86
MSI1O43347 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MSI1O43347 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MSI1O43347 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MSI1O43347 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MSI1O43347 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
MSI1O43347 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms