Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.64■□□□□ 0.57
CLOCKO15516 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.64■□□□□ 0.57
CLOCKO15516 AC006015.1-201ENST00000429970 570 ntBASIC18.64■□□□□ 0.57
CLOCKO15516 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.64■□□□□ 0.57
CLOCKO15516 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.64■□□□□ 0.57
CLOCKO15516 AC120498.10-201ENST00000621827 505 ntBASIC18.64■□□□□ 0.57
CLOCKO15516 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.64■□□□□ 0.57
CLOCKO15516 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CLOCKO15516 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLOCKO15516 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLOCKO15516 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.64■□□□□ 0.57
CLOCKO15516 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLOCKO15516 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.63■□□□□ 0.57
CLOCKO15516 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLOCKO15516 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.63■□□□□ 0.57
CLOCKO15516 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLOCKO15516 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.63■□□□□ 0.57
CLOCKO15516 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.63■□□□□ 0.57
CLOCKO15516 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.63■□□□□ 0.57
CLOCKO15516 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.63■□□□□ 0.57
CLOCKO15516 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.63■□□□□ 0.57
CLOCKO15516 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLOCKO15516 BID-214ENST00000617586 542 ntTSL 5 BASIC18.63■□□□□ 0.57
CLOCKO15516 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLOCKO15516 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.63■□□□□ 0.57
CLOCKO15516 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLOCKO15516 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CLOCKO15516 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.63■□□□□ 0.57
CLOCKO15516 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.63■□□□□ 0.57
CLOCKO15516 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.63■□□□□ 0.57
CLOCKO15516 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLOCKO15516 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.63■□□□□ 0.57
CLOCKO15516 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 AC007613.1-201ENST00000572811 2597 ntBASIC18.62■□□□□ 0.57
CLOCKO15516 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.62■□□□□ 0.57
CLOCKO15516 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.62■□□□□ 0.57
CLOCKO15516 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLOCKO15516 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.62■□□□□ 0.57
CLOCKO15516 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.62■□□□□ 0.57
CLOCKO15516 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLOCKO15516 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.62■□□□□ 0.57
CLOCKO15516 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLOCKO15516 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.62■□□□□ 0.57
CLOCKO15516 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.62■□□□□ 0.57
CLOCKO15516 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLOCKO15516 HCG11-201ENST00000411553 5696 ntBASIC18.61■□□□□ 0.57
CLOCKO15516 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.61■□□□□ 0.57
CLOCKO15516 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CLOCKO15516 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLOCKO15516 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.61■□□□□ 0.57
CLOCKO15516 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLOCKO15516 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 AC010141.2-201ENST00000452426 721 ntBASIC18.61■□□□□ 0.57
CLOCKO15516 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.61■□□□□ 0.57
CLOCKO15516 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.61■□□□□ 0.57
CLOCKO15516 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLOCKO15516 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLOCKO15516 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLOCKO15516 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLOCKO15516 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms