Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
RTL8CO15255 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.13□□□□□ -0.31
RTL8CO15255 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.13□□□□□ -0.31
RTL8CO15255 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.13□□□□□ -0.31
RTL8CO15255 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RTL8CO15255 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.13□□□□□ -0.31
RTL8CO15255 AC139887.4-201ENST00000607877 719 ntBASIC13.13□□□□□ -0.31
RTL8CO15255 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTL8CO15255 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTL8CO15255 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTL8CO15255 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTL8CO15255 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTL8CO15255 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTL8CO15255 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.13□□□□□ -0.31
RTL8CO15255 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTL8CO15255 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.12□□□□□ -0.31
RTL8CO15255 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RTL8CO15255 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.12□□□□□ -0.31
RTL8CO15255 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 KRT126P-201ENST00000549467 1181 ntBASIC13.12□□□□□ -0.31
RTL8CO15255 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.12□□□□□ -0.31
RTL8CO15255 SLC25A1P4-201ENST00000567977 778 ntBASIC13.12□□□□□ -0.31
RTL8CO15255 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 AC131212.4-201ENST00000623606 975 ntBASIC13.12□□□□□ -0.31
RTL8CO15255 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.12□□□□□ -0.31
RTL8CO15255 KRT8P17-201ENST00000453110 1448 ntBASIC13.12□□□□□ -0.31
RTL8CO15255 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTL8CO15255 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.12□□□□□ -0.31
RTL8CO15255 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
RTL8CO15255 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RTL8CO15255 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RTL8CO15255 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.11□□□□□ -0.31
RTL8CO15255 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 RNF152P1-201ENST00000397754 604 ntBASIC13.11□□□□□ -0.31
RTL8CO15255 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.11□□□□□ -0.31
RTL8CO15255 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.11□□□□□ -0.31
RTL8CO15255 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.11□□□□□ -0.31
RTL8CO15255 AL138966.2-201ENST00000621997 464 ntBASIC13.11□□□□□ -0.31
RTL8CO15255 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RTL8CO15255 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RTL8CO15255 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.11□□□□□ -0.31
RTL8CO15255 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
RTL8CO15255 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
RTL8CO15255 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.1□□□□□ -0.31
RTL8CO15255 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC13.1□□□□□ -0.31
RTL8CO15255 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.1□□□□□ -0.31
RTL8CO15255 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RTL8CO15255 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.1□□□□□ -0.31
RTL8CO15255 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RTL8CO15255 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
RTL8CO15255 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
RTL8CO15255 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.1□□□□□ -0.31
RTL8CO15255 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.1□□□□□ -0.31
RTL8CO15255 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RTL8CO15255 TPM4P1-201ENST00000436100 807 ntBASIC13.1□□□□□ -0.31
RTL8CO15255 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.1□□□□□ -0.31
RTL8CO15255 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RTL8CO15255 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.1□□□□□ -0.31
RTL8CO15255 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.1□□□□□ -0.31
RTL8CO15255 AP000550.4-202ENST00000639755 178 ntBASIC13.1□□□□□ -0.31
RTL8CO15255 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms