Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FAM223BA6NKX1 AP006587.1-201ENST00000534129 1502 ntBASIC15.33■□□□□ 0.04
FAM223BA6NKX1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 ESRRAP1-201ENST00000400596 1257 ntBASIC15.32■□□□□ 0.04
FAM223BA6NKX1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 YBX1P10-201ENST00000444752 975 ntBASIC15.32■□□□□ 0.04
FAM223BA6NKX1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 AC008403.3-201ENST00000598924 454 ntBASIC15.32■□□□□ 0.04
FAM223BA6NKX1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FAM223BA6NKX1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM223BA6NKX1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM223BA6NKX1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms