Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 TFP1-202ENST00000475455 1573 ntBASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 AC120498.8-201ENST00000614275 531 ntBASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC162PA2VCL2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC162PA2VCL2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC162PA2VCL2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC162PA2VCL2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CCDC162PA2VCL2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC162PA2VCL2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC162PA2VCL2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC162PA2VCL2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC162PA2VCL2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
CCDC162PA2VCL2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 UNC93B5-201ENST00000530315 699 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms