Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 REXO1L12P-201ENST00000622156 912 ntBASIC29.23■■■□□ 2.27
HFM1A2PYH4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
HFM1A2PYH4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC29.23■■■□□ 2.27
HFM1A2PYH4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC29.23■■■□□ 2.27
HFM1A2PYH4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC29.23■■■□□ 2.27
HFM1A2PYH4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
HFM1A2PYH4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
HFM1A2PYH4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC29.23■■■□□ 2.27
HFM1A2PYH4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC29.22■■■□□ 2.27
HFM1A2PYH4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.22■■■□□ 2.27
HFM1A2PYH4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC29.22■■■□□ 2.27
HFM1A2PYH4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
HFM1A2PYH4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
HFM1A2PYH4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
HFM1A2PYH4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
HFM1A2PYH4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
HFM1A2PYH4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
HFM1A2PYH4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
HFM1A2PYH4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
HFM1A2PYH4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC29.22■■■□□ 2.27
HFM1A2PYH4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
HFM1A2PYH4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
HFM1A2PYH4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC29.22■■■□□ 2.27
HFM1A2PYH4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
HFM1A2PYH4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC29.21■■■□□ 2.27
HFM1A2PYH4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
HFM1A2PYH4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
HFM1A2PYH4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
HFM1A2PYH4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC29.21■■■□□ 2.27
HFM1A2PYH4 AC116562.2-201ENST00000507042 360 ntBASIC29.21■■■□□ 2.27
HFM1A2PYH4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC29.21■■■□□ 2.27
HFM1A2PYH4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC29.21■■■□□ 2.27
HFM1A2PYH4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC29.21■■■□□ 2.27
HFM1A2PYH4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC29.21■■■□□ 2.27
HFM1A2PYH4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC29.21■■■□□ 2.27
HFM1A2PYH4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
HFM1A2PYH4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
HFM1A2PYH4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC29.2■■■□□ 2.27
HFM1A2PYH4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC29.2■■■□□ 2.27
HFM1A2PYH4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.27
HFM1A2PYH4 BX088651.1-201ENST00000540551 451 ntBASIC29.2■■■□□ 2.27
HFM1A2PYH4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
HFM1A2PYH4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.26
HFM1A2PYH4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
HFM1A2PYH4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.26
HFM1A2PYH4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
HFM1A2PYH4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
HFM1A2PYH4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC29.2■■■□□ 2.26
HFM1A2PYH4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC29.2■■■□□ 2.26
HFM1A2PYH4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
HFM1A2PYH4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
HFM1A2PYH4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
HFM1A2PYH4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
HFM1A2PYH4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC29.19■■■□□ 2.26
HFM1A2PYH4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC29.19■■■□□ 2.26
HFM1A2PYH4 LBX2-AS1-202ENST00000603175 2083 ntBASIC29.19■■■□□ 2.26
HFM1A2PYH4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
HFM1A2PYH4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
HFM1A2PYH4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
HFM1A2PYH4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
HFM1A2PYH4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC29.19■■■□□ 2.26
HFM1A2PYH4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
HFM1A2PYH4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC29.18■■■□□ 2.26
HFM1A2PYH4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC29.18■■■□□ 2.26
HFM1A2PYH4 KRT17P2-201ENST00000300992 1314 ntBASIC29.18■■■□□ 2.26
HFM1A2PYH4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC29.18■■■□□ 2.26
HFM1A2PYH4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
HFM1A2PYH4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC29.18■■■□□ 2.26
HFM1A2PYH4 AC112907.3-201ENST00000577781 2400 ntBASIC29.18■■■□□ 2.26
HFM1A2PYH4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC29.17■■■□□ 2.26
HFM1A2PYH4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
HFM1A2PYH4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
HFM1A2PYH4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
HFM1A2PYH4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
HFM1A2PYH4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
HFM1A2PYH4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
HFM1A2PYH4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC29.17■■■□□ 2.26
HFM1A2PYH4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
HFM1A2PYH4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
HFM1A2PYH4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC29.17■■■□□ 2.26
HFM1A2PYH4 Z85996.1-201ENST00000494644 937 ntBASIC29.17■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms