Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV5S1A1TA0A578 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV5S1A1TA0A578 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.57■□□□□ 0.88
TCRBV5S1A1TA0A578 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 PKD1P6-201ENST00000343738 4769 ntBASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 POM121L13P-201ENST00000422362 380 ntBASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TCRBV5S1A1TA0A578 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.55■□□□□ 0.88
TCRBV5S1A1TA0A578 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 AP006587.1-201ENST00000534129 1502 ntBASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 YBX1P10-201ENST00000444752 975 ntBASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 KRT18P6-201ENST00000555540 1265 ntBASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV5S1A1TA0A578 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 RNA5SP413-201ENST00000516373 109 ntBASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 AP003097.1-201ENST00000530657 1135 ntBASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV5S1A1TA0A578 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms