Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV7S3A2A0A539 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV7S3A2A0A539 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.01■□□□□ 0.79
TCRBV7S3A2A0A539 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.01■□□□□ 0.79
TCRBV7S3A2A0A539 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV7S3A2A0A539 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.01■□□□□ 0.79
TCRBV7S3A2A0A539 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV7S3A2A0A539 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV7S3A2A0A539 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV7S3A2A0A539 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 AC116351.2-201ENST00000606540 1585 ntBASIC20■□□□□ 0.79
TCRBV7S3A2A0A539 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 AC026185.1-201ENST00000445748 174 ntBASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TCRBV7S3A2A0A539 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 AL137784.2-201ENST00000607332 1000 ntBASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV7S3A2A0A539 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.97■□□□□ 0.79
TCRBV7S3A2A0A539 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms