Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 AC124016.1-201ENST00000609552 612 ntBASIC16.17■□□□□ 0.18
A0A1W2PRF3 AP006294.2-201ENST00000641667 209 ntBASIC16.17■□□□□ 0.18
A0A1W2PRF3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 AC112907.3-201ENST00000577781 2400 ntBASIC16.17■□□□□ 0.18
A0A1W2PRF3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
A0A1W2PRF3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
A0A1W2PRF3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
A0A1W2PRF3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
A0A1W2PRF3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
A0A1W2PRF3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 UBE2SP1-201ENST00000450587 669 ntBASIC16.16■□□□□ 0.18
A0A1W2PRF3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.16■□□□□ 0.18
A0A1W2PRF3 AL121906.2-201ENST00000621597 723 ntBASIC16.16■□□□□ 0.18
A0A1W2PRF3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
A0A1W2PRF3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
A0A1W2PRF3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
A0A1W2PRF3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
A0A1W2PRF3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
A0A1W2PRF3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.15■□□□□ 0.18
A0A1W2PRF3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.15■□□□□ 0.18
A0A1W2PRF3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.15■□□□□ 0.18
A0A1W2PRF3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.15■□□□□ 0.18
A0A1W2PRF3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.15■□□□□ 0.18
A0A1W2PRF3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
A0A1W2PRF3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
A0A1W2PRF3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
A0A1W2PRF3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
A0A1W2PRF3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
A0A1W2PRF3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms