Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.83■□□□□ 0.45
TRAV17A0A0B4J275 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 ATP5G1P1-201ENST00000448724 379 ntBASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 SLC25A1P4-201ENST00000567977 778 ntBASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 AP000692.2-201ENST00000608391 879 ntBASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 AC011298.2-201ENST00000617989 482 ntBASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 HLA-A-209ENST00000638375 975 ntBASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 RCC2P6-201ENST00000526625 1557 ntBASIC17.83■□□□□ 0.44
TRAV17A0A0B4J275 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 AC073508.3-201ENST00000619697 1419 ntBASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 AC004951.3-201ENST00000418645 1148 ntBASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 TMEM179-206ENST00000616017 1645 ntBASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRAV17A0A0B4J275 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV17A0A0B4J275 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 BX119927.1-201ENST00000636596 1552 ntBASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 FAM207BP-201ENST00000447172 505 ntBASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms