Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 MMP23A-201ENST00000234610 1017 ntBASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 RBM17P1-201ENST00000453646 1190 ntBASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 AL445675.2-201ENST00000620291 557 ntBASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV5A0A0B4J1U4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 TMEM179-206ENST00000616017 1645 ntBASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 AC116562.2-201ENST00000507042 360 ntBASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV5A0A0B4J1U4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.64■□□□□ 0.42
TRGV5A0A0B4J1U4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRGV5A0A0B4J1U4 FEM1AP1-201ENST00000431297 1995 ntBASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 AL512408.1-201ENST00000569378 2000 ntBASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 AP000525.1-201ENST00000608286 694 ntBASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 AC131212.4-201ENST00000623606 975 ntBASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV5A0A0B4J1U4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 GABARAPL3-202ENST00000624044 1851 ntBASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.63■□□□□ 0.41
TRGV5A0A0B4J1U4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms