Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 OR5D2P-201ENST00000524390 911 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 MIR4502-201ENST00000580432 81 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 DYNLL1P1-201ENST00000595442 269 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC064872.1-201ENST00000604823 1072 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AL365400.2-201ENST00000605604 902 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AL352984.2-201ENST00000611153 546 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 OFD1P17-201ENST00000437639 3018 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 AC073365.1-203ENST00000641055 1992 ntBASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP1Q96SZ6 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 RNA5SP346-201ENST00000363541 121 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 CXADRP1-201ENST00000398098 1095 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AL024507.1-201ENST00000412741 274 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AL035422.1-201ENST00000414193 397 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 UBE2V1P14-201ENST00000415815 558 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 RPSAP65-201ENST00000429660 595 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 RPS6P15-201ENST00000431996 751 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC010240.2-201ENST00000445363 1205 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 PRDX3P4-201ENST00000470828 747 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 RAP1BP2-201ENST00000478270 544 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 RN7SL423P-201ENST00000486202 304 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 RPL12P30-201ENST00000488389 499 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 NPM1P27-201ENST00000502784 830 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC107401.1-201ENST00000503426 685 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 RNU6-334P-201ENST00000517072 102 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC011853.1-201ENST00000518911 454 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC036111.2-201ENST00000533247 901 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC073916.1-201ENST00000545095 130 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AP001823.1-201ENST00000604056 1003 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC010998.3-201ENST00000613871 631 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 CXADRP3-202ENST00000617265 1100 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AC009032.1-201ENST00000617574 431 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AP001153.1-201ENST00000641024 338 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 BX284613.1-201ENST00000452221 1641 ntBASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP1Q96SZ6 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms