RNA–Protein interactions for RNA: ENST00000545309.2

CTNNA3-205, Transcript of catenin alpha 3, humanhuman

TSL 5 BASIC

Gene CTNNA3, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-205ENST00000545309 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
CTNNA3-205ENST00000545309 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
CTNNA3-205ENST00000545309 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
CTNNA3-205ENST00000545309 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
CTNNA3-205ENST00000545309 FOXD1Q16676 465 aa17.94■□□□□ 0.46
CTNNA3-205ENST00000545309 PLPPR3Q6T4P5 718 aa17.68■□□□□ 0.42
CTNNA3-205ENST00000545309 ADRA2BP18089 450 aa17.01■□□□□ 0.31
CTNNA3-205ENST00000545309 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
CTNNA3-205ENST00000545309 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
CTNNA3-205ENST00000545309 MSH5O43196 834 aa16.74■□□□□ 0.27
CTNNA3-205ENST00000545309 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
CTNNA3-205ENST00000545309 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
CTNNA3-205ENST00000545309 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
CTNNA3-205ENST00000545309 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
CTNNA3-205ENST00000545309 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
CTNNA3-205ENST00000545309 CNKSR2Q8WXI2 1034 aa15.17■□□□□ 0.02
CTNNA3-205ENST00000545309 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
CTNNA3-205ENST00000545309 NISCHQ9Y2I1 1504 aa15.02■□□□□ -0
CTNNA3-205ENST00000545309 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
CTNNA3-205ENST00000545309 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
CTNNA3-205ENST00000545309 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
CTNNA3-205ENST00000545309 KCNA4P22459 653 aa14.8□□□□□ -0.04
CTNNA3-205ENST00000545309 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
CTNNA3-205ENST00000545309 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
CTNNA3-205ENST00000545309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
CTNNA3-205ENST00000545309 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
CTNNA3-205ENST00000545309 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
CTNNA3-205ENST00000545309 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
CTNNA3-205ENST00000545309 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
CTNNA3-205ENST00000545309 SLC4A2P04920 1241 aa14□□□□□ -0.17
CTNNA3-205ENST00000545309 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
CTNNA3-205ENST00000545309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
CTNNA3-205ENST00000545309 HNRNPUL2Q1KMD3 747 aaKnown RBP13.79□□□□□ -0.2
CTNNA3-205ENST00000545309 APLP2Q06481 763 aa13.75□□□□□ -0.21
CTNNA3-205ENST00000545309 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
CTNNA3-205ENST00000545309 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
CTNNA3-205ENST00000545309 CAPN15O75808 1086 aa13.71□□□□□ -0.21
CTNNA3-205ENST00000545309 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
CTNNA3-205ENST00000545309 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
CTNNA3-205ENST00000545309 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
CTNNA3-205ENST00000545309 ZBTB22O15209 634 aa13.55□□□□□ -0.24
CTNNA3-205ENST00000545309 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
CTNNA3-205ENST00000545309 DSG3P32926 999 aa13.47□□□□□ -0.25
CTNNA3-205ENST00000545309 ABCB7O75027 752 aa13.38□□□□□ -0.27
CTNNA3-205ENST00000545309 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
CTNNA3-205ENST00000545309 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
CTNNA3-205ENST00000545309 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
CTNNA3-205ENST00000545309 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
CTNNA3-205ENST00000545309 POLA2Q14181 598 aa13.24□□□□□ -0.29
CTNNA3-205ENST00000545309 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
CTNNA3-205ENST00000545309 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
CTNNA3-205ENST00000545309 ABCC9O60706 1549 aa13.05□□□□□ -0.32
CTNNA3-205ENST00000545309 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
CTNNA3-205ENST00000545309 FBLN2P98095 1184 aa12.89□□□□□ -0.35
CTNNA3-205ENST00000545309 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
CTNNA3-205ENST00000545309 MKRN4PQ13434 485 aaPredicted RBP12.7□□□□□ -0.38
CTNNA3-205ENST00000545309 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
CTNNA3-205ENST00000545309 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
CTNNA3-205ENST00000545309 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
CTNNA3-205ENST00000545309 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
CTNNA3-205ENST00000545309 ZCCHC6Q5VYS8 1495 aaKnown RBP12.59□□□□□ -0.39
CTNNA3-205ENST00000545309 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
CTNNA3-205ENST00000545309 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
CTNNA3-205ENST00000545309 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
CTNNA3-205ENST00000545309 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.41
CTNNA3-205ENST00000545309 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
CTNNA3-205ENST00000545309 POTEHQ6S545 545 aa12.41□□□□□ -0.42
CTNNA3-205ENST00000545309 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
CTNNA3-205ENST00000545309 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
CTNNA3-205ENST00000545309 SPDYE1Q8NFV5 336 aaPredicted RBP12.37□□□□□ -0.43
CTNNA3-205ENST00000545309 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
CTNNA3-205ENST00000545309 DCAF1Q9Y4B6 1507 aa12.34□□□□□ -0.43
CTNNA3-205ENST00000545309 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
CTNNA3-205ENST00000545309 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
CTNNA3-205ENST00000545309 NACADO15069 1562 aa12.26□□□□□ -0.45
CTNNA3-205ENST00000545309 MYO15BQ96JP2 1530 aa12.23□□□□□ -0.45
CTNNA3-205ENST00000545309 DNAJC5Q9H3Z4 198 aa12.23□□□□□ -0.45
CTNNA3-205ENST00000545309 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
CTNNA3-205ENST00000545309 RB1CC1Q8TDY2 1594 aa12.21□□□□□ -0.46
CTNNA3-205ENST00000545309 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.46
CTNNA3-205ENST00000545309 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
CTNNA3-205ENST00000545309 SCRIBQ14160 1630 aa12.16□□□□□ -0.46
CTNNA3-205ENST00000545309 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
CTNNA3-205ENST00000545309 UNC13AQ9UPW8 1703 aa12.12□□□□□ -0.47
CTNNA3-205ENST00000545309 SLC24A1O60721 1099 aa12.12□□□□□ -0.47
CTNNA3-205ENST00000545309 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
CTNNA3-205ENST00000545309 FKBP8Q14318 412 aa12.09□□□□□ -0.47
CTNNA3-205ENST00000545309 PROM2Q8N271 834 aa12.02□□□□□ -0.49
CTNNA3-205ENST00000545309 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
CTNNA3-205ENST00000545309 HAX1O00165 279 aa11.98□□□□□ -0.49
CTNNA3-205ENST00000545309 BICRAQ9NZM4 1560 aa11.96□□□□□ -0.49
CTNNA3-205ENST00000545309 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
CTNNA3-205ENST00000545309 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
CTNNA3-205ENST00000545309 CC2D2AQ9P2K1 1620 aa11.84□□□□□ -0.51
CTNNA3-205ENST00000545309 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
CTNNA3-205ENST00000545309 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
CTNNA3-205ENST00000545309 MIER1Q8N108 512 aa11.8□□□□□ -0.52
CTNNA3-205ENST00000545309 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
CTNNA3-205ENST00000545309 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
CTNNA3-205ENST00000545309 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms