Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FO082796.1-201ENST00000523795 183 ntBASIC8.28□□□□□ -1.08
PHOX2BQ99453 AC243972.3-201ENST00000539655 198 ntBASIC8.28□□□□□ -1.08
PHOX2BQ99453 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PHOX2BQ99453 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 AC138207.8-204ENST00000579588 527 ntBASIC8.28□□□□□ -1.08
PHOX2BQ99453 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PHOX2BQ99453 AC022916.3-201ENST00000592961 742 ntBASIC8.28□□□□□ -1.08
PHOX2BQ99453 EDRF1-AS1-202ENST00000593871 592 ntTSL 5 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 AC007621.1-201ENST00000604544 437 ntBASIC8.28□□□□□ -1.08
PHOX2BQ99453 AC008115.3-201ENST00000614874 549 ntBASIC8.28□□□□□ -1.08
PHOX2BQ99453 KRT7-214ENST00000638501 398 ntTSL 5 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 AL596275.2-203ENST00000641951 371 ntBASIC8.28□□□□□ -1.08
PHOX2BQ99453 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
PHOX2BQ99453 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PHOX2BQ99453 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.28□□□□□ -1.08
PHOX2BQ99453 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PHOX2BQ99453 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PHOX2BQ99453 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.28□□□□□ -1.08
PHOX2BQ99453 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
PHOX2BQ99453 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
PHOX2BQ99453 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
PHOX2BQ99453 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
PHOX2BQ99453 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
PHOX2BQ99453 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.08
PHOX2BQ99453 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC8.27□□□□□ -1.08
PHOX2BQ99453 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
PHOX2BQ99453 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 RNU6-738P-201ENST00000384531 106 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC090114.1-201ENST00000393266 448 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 RN7SKP140-201ENST00000411196 284 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AL513302.1-201ENST00000415679 428 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 RPS7P8-201ENST00000418311 581 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC002504.1-201ENST00000438281 691 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 AL592114.2-201ENST00000440142 532 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 PPIAP32-201ENST00000449940 472 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 SLC31A1P1-201ENST00000451221 567 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 RPS4XP19-201ENST00000460237 736 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC098799.3-201ENST00000506095 438 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC002456.2-201ENST00000509356 380 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC026700.1-201ENST00000512074 544 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC024405.1-201ENST00000532521 1042 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 HPRT1P3-201ENST00000539521 576 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 MIR4307-201ENST00000582802 84 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC243960.4-201ENST00000600532 288 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC011816.2-201ENST00000607089 556 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 MAPK10-312ENST00000641391 2488 ntAPPRIS P2 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 MAPK10-378ENST00000642009 2463 ntAPPRIS P2 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.27□□□□□ -1.09
PHOX2BQ99453 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PHOX2BQ99453 AC127459.1-201ENST00000563129 2768 ntBASIC8.27□□□□□ -1.09
PHOX2BQ99453 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms