Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.61□□□□□ -1.51
CDKN2DP55273 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CDKN2DP55273 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 AP000432.2-201ENST00000624164 2048 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 AL049634.1-201ENST00000453770 1720 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CDKN2DP55273 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 RN7SKP275-201ENST00000364626 301 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 RNA5SP30-201ENST00000365552 115 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKN2DP55273 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDKN2DP55273 RPS6P23-201ENST00000413224 722 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.6□□□□□ -1.51
CDKN2DP55273 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKN2DP55273 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.6□□□□□ -1.51
CDKN2DP55273 AL512637.1-201ENST00000439523 1231 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKN2DP55273 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 HLA-DPA3-207ENST00000454398 229 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKN2DP55273 RN7SKP253-201ENST00000516424 309 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKN2DP55273 DPPA2P4-201ENST00000563717 878 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKN2DP55273 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 COX6CP7-201ENST00000597056 208 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 AC063977.5-201ENST00000601044 974 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 AC018809.2-201ENST00000602436 3823 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 AC090607.5-201ENST00000615692 224 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 FO681491.1-202ENST00000623392 737 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 OR8G3P-202ENST00000641572 1255 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDKN2DP55273 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
CDKN2DP55273 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDKN2DP55273 CASC19-260ENST00000641828 2001 ntBASIC5.6□□□□□ -1.51
CDKN2DP55273 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CDKN2DP55273 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.6□□□□□ -1.51
CDKN2DP55273 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKN2DP55273 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 AL137058.3-201ENST00000624531 3099 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDKN2DP55273 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDKN2DP55273 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKN2DP55273 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDKN2DP55273 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDKN2DP55273 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDKN2DP55273 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDKN2DP55273 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 GAPDHP24-201ENST00000328713 983 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 RNA5SP433-201ENST00000364491 114 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 RN7SKP187-201ENST00000365536 330 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDKN2DP55273 OR7E156P-201ENST00000400303 464 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.59□□□□□ -1.51
CDKN2DP55273 AK4P4-201ENST00000419465 646 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 AL035660.1-201ENST00000422041 222 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 NPM1P25-201ENST00000429734 854 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 TMEM183AP1-205ENST00000432739 290 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.59□□□□□ -1.51
CDKN2DP55273 SNORD125-201ENST00000459538 96 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 DUTP7-201ENST00000507982 486 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 AC060775.1-201ENST00000518241 520 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.59□□□□□ -1.51
CDKN2DP55273 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.59□□□□□ -1.51
CDKN2DP55273 OR5D2P-201ENST00000524390 911 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 TRIM77BP-201ENST00000524985 1119 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 BCAS2P1-201ENST00000528022 632 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 AC024405.1-201ENST00000532521 1042 ntBASIC5.59□□□□□ -1.51
CDKN2DP55273 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.59□□□□□ -1.51
CDKN2DP55273 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.59□□□□□ -1.51
CDKN2DP55273 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.59□□□□□ -1.51
CDKN2DP55273 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKN2DP55273 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKN2DP55273 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.59□□□□□ -1.51
CDKN2DP55273 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.59□□□□□ -1.51
CDKN2DP55273 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.59□□□□□ -1.52
CDKN2DP55273 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDKN2DP55273 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.52
CDKN2DP55273 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CDKN2DP55273 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKN2DP55273 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms