RNA–Protein interactions for RNA: ENST00000640599.1

ZNF253-205, Transcript of zinc finger protein 253, humanhuman

TSL 1 (best) BASIC

Gene ZNF253, Length 1,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253-205ENST00000640599 AEBP2Q6ZN18 517 aaPredicted RBP28.36■■■□□ 2.13
ZNF253-205ENST00000640599 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
ZNF253-205ENST00000640599 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
ZNF253-205ENST00000640599 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
ZNF253-205ENST00000640599 PLPPR3Q6T4P5 718 aa22.45■■□□□ 1.18
ZNF253-205ENST00000640599 FOXD1Q16676 465 aa22.35■■□□□ 1.17
ZNF253-205ENST00000640599 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
ZNF253-205ENST00000640599 ADRA2BP18089 450 aa21.49■■□□□ 1.03
ZNF253-205ENST00000640599 PIAS4Q8N2W9 510 aaPredicted RBP21.07■□□□□ 0.96
ZNF253-205ENST00000640599 MSH5O43196 834 aa20.59■□□□□ 0.89
ZNF253-205ENST00000640599 PPP4R3CPQ6ZMV5 832 aa19.8■□□□□ 0.76
ZNF253-205ENST00000640599 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
ZNF253-205ENST00000640599 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
ZNF253-205ENST00000640599 KCNA4P22459 653 aa19.34■□□□□ 0.69
ZNF253-205ENST00000640599 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
ZNF253-205ENST00000640599 CNKSR2Q8WXI2 1034 aa19.23■□□□□ 0.67
ZNF253-205ENST00000640599 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
ZNF253-205ENST00000640599 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
ZNF253-205ENST00000640599 RNF216Q9NWF9 866 aaPredicted RBP18.86■□□□□ 0.61
ZNF253-205ENST00000640599 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
ZNF253-205ENST00000640599 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
ZNF253-205ENST00000640599 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
ZNF253-205ENST00000640599 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
ZNF253-205ENST00000640599 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
ZNF253-205ENST00000640599 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
ZNF253-205ENST00000640599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.46
ZNF253-205ENST00000640599 EHMT2Q96KQ7 1210 aa17.88■□□□□ 0.45
ZNF253-205ENST00000640599 ZBTB22O15209 634 aa17.79■□□□□ 0.44
ZNF253-205ENST00000640599 FOXD4L1Q9NU39 408 aa17.78■□□□□ 0.44
ZNF253-205ENST00000640599 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
ZNF253-205ENST00000640599 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
ZNF253-205ENST00000640599 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
ZNF253-205ENST00000640599 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
ZNF253-205ENST00000640599 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
ZNF253-205ENST00000640599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.38■□□□□ 0.37
ZNF253-205ENST00000640599 HNRNPUL2Q1KMD3 747 aaKnown RBP17.38■□□□□ 0.37
ZNF253-205ENST00000640599 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
ZNF253-205ENST00000640599 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
ZNF253-205ENST00000640599 APLP2Q06481 763 aa17.2■□□□□ 0.34
ZNF253-205ENST00000640599 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
ZNF253-205ENST00000640599 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
ZNF253-205ENST00000640599 CAPN15O75808 1086 aa17.09■□□□□ 0.33
ZNF253-205ENST00000640599 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
ZNF253-205ENST00000640599 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
ZNF253-205ENST00000640599 ZNF219Q9P2Y4 722 aaPredicted RBP16.97■□□□□ 0.31
ZNF253-205ENST00000640599 DSG3P32926 999 aa16.79■□□□□ 0.28
ZNF253-205ENST00000640599 ABCB7O75027 752 aa16.78■□□□□ 0.28
ZNF253-205ENST00000640599 POLA2Q14181 598 aa16.72■□□□□ 0.27
ZNF253-205ENST00000640599 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
ZNF253-205ENST00000640599 FBLN2P98095 1184 aa16.36■□□□□ 0.21
ZNF253-205ENST00000640599 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
ZNF253-205ENST00000640599 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
ZNF253-205ENST00000640599 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
ZNF253-205ENST00000640599 SPDYE2BA6NHP3 402 aa15.98■□□□□ 0.15
ZNF253-205ENST00000640599 SPDYE6P0CI01 402 aa15.98■□□□□ 0.15
ZNF253-205ENST00000640599 FKBP8Q14318 412 aa15.98■□□□□ 0.15
ZNF253-205ENST00000640599 SPDYE2Q495Y8 402 aa15.98■□□□□ 0.15
ZNF253-205ENST00000640599 SPDYE4A6NLX3 237 aa15.97■□□□□ 0.15
ZNF253-205ENST00000640599 ZNF692Q9BU19 519 aaPredicted RBP15.93■□□□□ 0.14
ZNF253-205ENST00000640599 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
ZNF253-205ENST00000640599 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
ZNF253-205ENST00000640599 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
ZNF253-205ENST00000640599 PROM2Q8N271 834 aa15.68■□□□□ 0.1
ZNF253-205ENST00000640599 REM2Q8IYK8 340 aaPredicted RBP15.66■□□□□ 0.1
ZNF253-205ENST00000640599 SPDYE1Q8NFV5 336 aaPredicted RBP15.53■□□□□ 0.08
ZNF253-205ENST00000640599 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
ZNF253-205ENST00000640599 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
ZNF253-205ENST00000640599 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
ZNF253-205ENST00000640599 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
ZNF253-205ENST00000640599 CHRDL2Q6WN34 429 aa15.36■□□□□ 0.05
ZNF253-205ENST00000640599 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
ZNF253-205ENST00000640599 VASPP50552 380 aaPredicted RBP15.21■□□□□ 0.03
ZNF253-205ENST00000640599 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
ZNF253-205ENST00000640599 MIER1Q8N108 512 aa15.16■□□□□ 0.02
ZNF253-205ENST00000640599 PIP4P2Q8N4L2 257 aa15.16■□□□□ 0.02
ZNF253-205ENST00000640599 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
ZNF253-205ENST00000640599 CREBZFQ9NS37 354 aa15.12■□□□□ 0.01
ZNF253-205ENST00000640599 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
ZNF253-205ENST00000640599 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
ZNF253-205ENST00000640599 PLEKHG5O94827 1062 aa15.05■□□□□ -0
ZNF253-205ENST00000640599 IFNLR1Q8IU57 520 aaPredicted RBP14.99□□□□□ -0.01
ZNF253-205ENST00000640599 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
ZNF253-205ENST00000640599 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
ZNF253-205ENST00000640599 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
ZNF253-205ENST00000640599 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
ZNF253-205ENST00000640599 POTEHQ6S545 545 aa14.89□□□□□ -0.03
ZNF253-205ENST00000640599 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
ZNF253-205ENST00000640599 SPOCK2Q92563 424 aa14.82□□□□□ -0.04
ZNF253-205ENST00000640599 NUBP1P53384 320 aa14.76□□□□□ -0.05
ZNF253-205ENST00000640599 RASEFQ8IZ41 740 aa14.71□□□□□ -0.05
ZNF253-205ENST00000640599 HAX1O00165 279 aa14.68□□□□□ -0.06
ZNF253-205ENST00000640599 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
ZNF253-205ENST00000640599 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
ZNF253-205ENST00000640599 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.06
ZNF253-205ENST00000640599 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
ZNF253-205ENST00000640599 DCAF8Q5TAQ9 597 aa14.62□□□□□ -0.07
ZNF253-205ENST00000640599 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
ZNF253-205ENST00000640599 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
ZNF253-205ENST00000640599 GSE1Q14687 1217 aa14.58□□□□□ -0.08
ZNF253-205ENST00000640599 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms