Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.36□□□□□ -1.39
RB1P06400 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.35□□□□□ -1.39
RB1P06400 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
RB1P06400 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.35□□□□□ -1.39
RB1P06400 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 RPL7P58-201ENST00000402913 758 ntBASIC6.35□□□□□ -1.39
RB1P06400 AL589994.1-201ENST00000404962 340 ntBASIC6.35□□□□□ -1.39
RB1P06400 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.35□□□□□ -1.39
RB1P06400 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.35□□□□□ -1.39
RB1P06400 DEFA9P-201ENST00000433042 285 ntBASIC6.35□□□□□ -1.39
RB1P06400 OR13K1P-201ENST00000444577 975 ntBASIC6.35□□□□□ -1.39
RB1P06400 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.35□□□□□ -1.39
RB1P06400 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
RB1P06400 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 AC022215.1-201ENST00000481770 362 ntBASIC6.35□□□□□ -1.39
RB1P06400 OR5M14P-201ENST00000506803 618 ntBASIC6.35□□□□□ -1.39
RB1P06400 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 SNORA48.9-201ENST00000516419 162 ntBASIC6.35□□□□□ -1.39
RB1P06400 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.35□□□□□ -1.39
RB1P06400 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.35□□□□□ -1.39
RB1P06400 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.35□□□□□ -1.39
RB1P06400 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.35□□□□□ -1.39
RB1P06400 MIR3189-201ENST00000578735 73 ntBASIC6.35□□□□□ -1.39
RB1P06400 IMMP1LP3-201ENST00000604197 224 ntBASIC6.35□□□□□ -1.39
RB1P06400 AC145423.1-201ENST00000605712 336 ntBASIC6.35□□□□□ -1.39
RB1P06400 AL139099.4-201ENST00000614802 114 ntBASIC6.35□□□□□ -1.39
RB1P06400 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.35□□□□□ -1.39
RB1P06400 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.35□□□□□ -1.39
RB1P06400 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.35□□□□□ -1.39
RB1P06400 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.35□□□□□ -1.39
RB1P06400 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
RB1P06400 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.35□□□□□ -1.39
RB1P06400 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.35□□□□□ -1.39
RB1P06400 AC012078.1-201ENST00000405035 1646 ntBASIC6.35□□□□□ -1.39
RB1P06400 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RB1P06400 BIN2P1-201ENST00000504996 1530 ntBASIC6.35□□□□□ -1.39
RB1P06400 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 AC140479.2-201ENST00000421567 3130 ntBASIC6.34□□□□□ -1.39
RB1P06400 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
RB1P06400 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
RB1P06400 CASC19-248ENST00000641674 1356 ntBASIC6.34□□□□□ -1.39
RB1P06400 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.34□□□□□ -1.39
RB1P06400 THAP12P8-201ENST00000447914 2115 ntBASIC6.34□□□□□ -1.39
RB1P06400 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.34□□□□□ -1.39
RB1P06400 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 OR10R3P-201ENST00000361688 942 ntBASIC6.34□□□□□ -1.39
RB1P06400 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.34□□□□□ -1.39
RB1P06400 MRPL53P1-201ENST00000414323 319 ntBASIC6.34□□□□□ -1.39
RB1P06400 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.34□□□□□ -1.39
RB1P06400 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.34□□□□□ -1.39
RB1P06400 HMGB3P24-201ENST00000433260 622 ntBASIC6.34□□□□□ -1.39
RB1P06400 RPS7P3-201ENST00000443360 580 ntBASIC6.34□□□□□ -1.39
RB1P06400 AC005297.1-201ENST00000444765 862 ntBASIC6.34□□□□□ -1.39
RB1P06400 AL606490.1-201ENST00000452266 765 ntBASIC6.34□□□□□ -1.39
RB1P06400 OR7E157P-201ENST00000494376 911 ntBASIC6.34□□□□□ -1.39
RB1P06400 AC006499.3-201ENST00000506077 748 ntBASIC6.34□□□□□ -1.39
RB1P06400 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.34□□□□□ -1.39
RB1P06400 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RB1P06400 KCTD9P6-201ENST00000522306 950 ntBASIC6.34□□□□□ -1.39
RB1P06400 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.34□□□□□ -1.39
RB1P06400 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.34□□□□□ -1.39
RB1P06400 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.34□□□□□ -1.39
RB1P06400 KCTD9P4-201ENST00000526766 1166 ntBASIC6.34□□□□□ -1.39
RB1P06400 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.34□□□□□ -1.39
RB1P06400 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.34□□□□□ -1.39
RB1P06400 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 RNU4ATAC-201ENST00000580972 127 ntBASIC6.34□□□□□ -1.39
RB1P06400 MIR4260-201ENST00000583107 67 ntBASIC6.34□□□□□ -1.39
RB1P06400 AC008115.3-201ENST00000614874 549 ntBASIC6.34□□□□□ -1.39
RB1P06400 AC007204.2-201ENST00000615022 616 ntBASIC6.34□□□□□ -1.39
RB1P06400 AC021766.1-201ENST00000624404 741 ntBASIC6.34□□□□□ -1.39
RB1P06400 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.34□□□□□ -1.39
RB1P06400 CASC19-222ENST00000641321 1173 ntBASIC6.34□□□□□ -1.39
RB1P06400 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms