Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 GUCY2GP-201ENST00000479705 3222 ntBASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.69□□□□□ -1.02
ZC3H4Q9UPT8 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AL353795.1-201ENST00000439134 1775 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 RNU6-1251P-201ENST00000364502 107 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 RNU6-114P-201ENST00000384704 105 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 MTCO1P17-201ENST00000411522 491 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC007365.2-201ENST00000428806 458 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 USP9YP31-201ENST00000431405 881 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 EMC3-AS1-205ENST00000438698 534 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC094085.1-201ENST00000468914 584 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC108688.1-201ENST00000485817 713 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC091874.2-201ENST00000505889 720 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 RNU6-718P-201ENST00000516166 105 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 EIF4A3P1-201ENST00000578499 647 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 NDUFA8P1-201ENST00000605525 367 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 OR4C1P-202ENST00000641065 1569 ntBASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ZC3H4Q9UPT8 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 ENO1P4-201ENST00000416471 1785 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 MTND4P23-201ENST00000447723 1363 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 AP003471.1-202ENST00000319051 1988 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 FLJ42393-201ENST00000623801 2270 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 RNU6-1042P-201ENST00000384204 107 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 RNU2-66P-201ENST00000410650 161 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 HMGN1P14-201ENST00000412459 517 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 CHCHD3P1-201ENST00000425516 676 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 RPL7AP71-201ENST00000451120 739 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 RPL23P10-201ENST00000468780 412 ntBASIC8.67□□□□□ -1.02
ZC3H4Q9UPT8 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms