Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 MFSD8-218ENST00000641186 4448 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 EPS15P1-202ENST00000459691 2071 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AP000766.1-201ENST00000561746 4140 ntBASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHGA11Q9Y5H2 AC068733.2-201ENST00000605434 1418 ntBASIC7.52□□□□□ -1.2
PCDHGA11Q9Y5H2 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHGA11Q9Y5H2 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.52□□□□□ -1.2
PCDHGA11Q9Y5H2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.52□□□□□ -1.2
PCDHGA11Q9Y5H2 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHGA11Q9Y5H2 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.52□□□□□ -1.2
PCDHGA11Q9Y5H2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.2
PCDHGA11Q9Y5H2 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
PCDHGA11Q9Y5H2 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC022306.1-201ENST00000560489 1562 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 Y_RNA.38-201ENST00000362617 102 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 Y_RNA.402-201ENST00000383972 102 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 MIR217-201ENST00000384817 110 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 RFKP1-201ENST00000400940 428 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 YWHAZP3-201ENST00000415292 738 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 FTH1P5-201ENST00000425761 545 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 SKP1P3-201ENST00000429280 487 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 FTH1P7-201ENST00000450676 552 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 MED28P8-201ENST00000454831 521 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 RPL7P38-201ENST00000488396 739 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC069439.1-201ENST00000494739 167 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 RN7SL388P-201ENST00000498736 339 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC233724.1-201ENST00000503894 233 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC011352.3-201ENST00000505162 593 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 NACAP5-201ENST00000509863 636 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 PAICSP4-201ENST00000517543 1253 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 OR5AQ1P-201ENST00000527596 927 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AL133457.1-201ENST00000564251 987 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 DUXAP4-201ENST00000603046 613 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC233280.2-201ENST00000603917 1070 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 UBE2Q2P2-203ENST00000613592 761 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC027807.2-201ENST00000616099 408 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AP000648.2-201ENST00000624182 404 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 AC012078.1-201ENST00000405035 1646 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHGA11Q9Y5H2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms