Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.8□□□□□ -1.48
UBL4AP11441 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.8□□□□□ -1.48
UBL4AP11441 CR589904.2-201ENST00000612533 440 ntBASIC5.8□□□□□ -1.48
UBL4AP11441 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBL4AP11441 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.8□□□□□ -1.48
UBL4AP11441 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBL4AP11441 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.8□□□□□ -1.48
UBL4AP11441 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
UBL4AP11441 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBL4AP11441 AC110373.1-201ENST00000505994 3505 ntBASIC5.8□□□□□ -1.48
UBL4AP11441 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.8□□□□□ -1.48
UBL4AP11441 AC022325.1-201ENST00000502748 2199 ntBASIC5.8□□□□□ -1.48
UBL4AP11441 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.8□□□□□ -1.48
UBL4AP11441 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.8□□□□□ -1.48
UBL4AP11441 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
UBL4AP11441 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
UBL4AP11441 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
UBL4AP11441 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.8□□□□□ -1.48
UBL4AP11441 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBL4AP11441 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.8□□□□□ -1.48
UBL4AP11441 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.79□□□□□ -1.48
UBL4AP11441 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.79□□□□□ -1.48
UBL4AP11441 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
UBL4AP11441 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.79□□□□□ -1.48
UBL4AP11441 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 GUCY1B2-204ENST00000531898 1979 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
UBL4AP11441 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 RNU1-59P-201ENST00000364829 162 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 OR6K3-202ENST00000368146 996 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
UBL4AP11441 YWHAZP4-201ENST00000392459 708 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.79□□□□□ -1.48
UBL4AP11441 AC003045.1-201ENST00000398779 713 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 PRELID1P1-201ENST00000403549 660 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 RNA5SP115-201ENST00000411160 107 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.79□□□□□ -1.48
UBL4AP11441 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.79□□□□□ -1.48
UBL4AP11441 AL357078.2-201ENST00000416486 427 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 NENFP1-201ENST00000419476 466 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 AL354766.1-201ENST00000423396 542 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.79□□□□□ -1.48
UBL4AP11441 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.79□□□□□ -1.48
UBL4AP11441 AC234771.2-201ENST00000445718 597 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.79□□□□□ -1.48
UBL4AP11441 SNRPCP11-201ENST00000492453 205 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.79□□□□□ -1.48
UBL4AP11441 MTND3P24-201ENST00000506306 329 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.79□□□□□ -1.48
UBL4AP11441 AC138517.1-201ENST00000515724 568 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.79□□□□□ -1.48
UBL4AP11441 HMGB1P46-201ENST00000520062 610 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.79□□□□□ -1.48
UBL4AP11441 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.79□□□□□ -1.48
UBL4AP11441 RN7SL475P-201ENST00000583379 298 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 ADAD1P2-201ENST00000588476 646 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 AL589765.6-201ENST00000601909 549 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 MTCO2P22-201ENST00000603246 681 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 AC019131.2-201ENST00000609071 870 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 U1.25-201ENST00000614085 162 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 U1.31-201ENST00000620022 160 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 AC089999.3-201ENST00000622440 577 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 OR7E91P-202ENST00000642062 1198 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 OR5AC4P-202ENST00000642086 985 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.79□□□□□ -1.48
UBL4AP11441 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
UBL4AP11441 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBL4AP11441 AC079753.1-201ENST00000623243 3868 ntBASIC5.79□□□□□ -1.48
UBL4AP11441 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms