RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
NR1I3-208ENST00000412844 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
NR1I3-208ENST00000412844 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
NR1I3-208ENST00000412844 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
NR1I3-208ENST00000412844 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
NR1I3-208ENST00000412844 FOXD1Q16676 465 aa19.27■□□□□ 0.68
NR1I3-208ENST00000412844 ADRA2BP18089 450 aa18.72■□□□□ 0.59
NR1I3-208ENST00000412844 PPP6R1Q9UPN7 881 aa18.68■□□□□ 0.58
NR1I3-208ENST00000412844 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
NR1I3-208ENST00000412844 MSH5O43196 834 aa17.79■□□□□ 0.44
NR1I3-208ENST00000412844 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
NR1I3-208ENST00000412844 KCNA4P22459 653 aa17.29■□□□□ 0.36
NR1I3-208ENST00000412844 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
NR1I3-208ENST00000412844 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
NR1I3-208ENST00000412844 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
NR1I3-208ENST00000412844 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
NR1I3-208ENST00000412844 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
NR1I3-208ENST00000412844 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
NR1I3-208ENST00000412844 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
NR1I3-208ENST00000412844 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
NR1I3-208ENST00000412844 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
NR1I3-208ENST00000412844 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
NR1I3-208ENST00000412844 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
NR1I3-208ENST00000412844 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
NR1I3-208ENST00000412844 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
NR1I3-208ENST00000412844 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
NR1I3-208ENST00000412844 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
NR1I3-208ENST00000412844 ZBTB22O15209 634 aa15.86■□□□□ 0.13
NR1I3-208ENST00000412844 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
NR1I3-208ENST00000412844 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
NR1I3-208ENST00000412844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.11
NR1I3-208ENST00000412844 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
NR1I3-208ENST00000412844 ABCC9O60706 1549 aa15.53■□□□□ 0.08
NR1I3-208ENST00000412844 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
NR1I3-208ENST00000412844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
NR1I3-208ENST00000412844 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
NR1I3-208ENST00000412844 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
NR1I3-208ENST00000412844 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-208ENST00000412844 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
NR1I3-208ENST00000412844 APLP2Q06481 763 aa15.23■□□□□ 0.03
NR1I3-208ENST00000412844 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
NR1I3-208ENST00000412844 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
NR1I3-208ENST00000412844 ATF5Q9Y2D1 282 aaPredicted RBP15.04■□□□□ -0
NR1I3-208ENST00000412844 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
NR1I3-208ENST00000412844 CAPN15O75808 1086 aa14.92□□□□□ -0.02
NR1I3-208ENST00000412844 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
NR1I3-208ENST00000412844 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
NR1I3-208ENST00000412844 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
NR1I3-208ENST00000412844 CACNB1Q02641 598 aaPredicted RBP14.72□□□□□ -0.05
NR1I3-208ENST00000412844 POLA2Q14181 598 aa14.67□□□□□ -0.06
NR1I3-208ENST00000412844 NACADO15069 1562 aa14.66□□□□□ -0.06
NR1I3-208ENST00000412844 ABCB7O75027 752 aa14.61□□□□□ -0.07
NR1I3-208ENST00000412844 FBLN2P98095 1184 aa14.56□□□□□ -0.08
NR1I3-208ENST00000412844 DSG3P32926 999 aa14.53□□□□□ -0.08
NR1I3-208ENST00000412844 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
NR1I3-208ENST00000412844 FKBP8Q14318 412 aa14.51□□□□□ -0.09
NR1I3-208ENST00000412844 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
NR1I3-208ENST00000412844 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
NR1I3-208ENST00000412844 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
NR1I3-208ENST00000412844 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
NR1I3-208ENST00000412844 DCAF8L2P0C7V8 631 aa14.34□□□□□ -0.11
NR1I3-208ENST00000412844 SHROOM4Q9ULL8 1493 aa14.29□□□□□ -0.12
NR1I3-208ENST00000412844 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
NR1I3-208ENST00000412844 BICRAQ9NZM4 1560 aa14.27□□□□□ -0.12
NR1I3-208ENST00000412844 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
NR1I3-208ENST00000412844 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
NR1I3-208ENST00000412844 SPDYE2BA6NHP3 402 aa14.09□□□□□ -0.15
NR1I3-208ENST00000412844 SPDYE6P0CI01 402 aa14.09□□□□□ -0.15
NR1I3-208ENST00000412844 SPDYE2Q495Y8 402 aa14.09□□□□□ -0.15
NR1I3-208ENST00000412844 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
NR1I3-208ENST00000412844 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
NR1I3-208ENST00000412844 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
NR1I3-208ENST00000412844 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.16
NR1I3-208ENST00000412844 FBXO3Q9UK99 471 aa14□□□□□ -0.17
NR1I3-208ENST00000412844 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
NR1I3-208ENST00000412844 PROM2Q8N271 834 aa13.99□□□□□ -0.17
NR1I3-208ENST00000412844 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
NR1I3-208ENST00000412844 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
NR1I3-208ENST00000412844 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
NR1I3-208ENST00000412844 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
NR1I3-208ENST00000412844 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
NR1I3-208ENST00000412844 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
NR1I3-208ENST00000412844 VASPP50552 380 aaPredicted RBP13.73□□□□□ -0.21
NR1I3-208ENST00000412844 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
NR1I3-208ENST00000412844 CUX2O14529 1486 aa13.66□□□□□ -0.22
NR1I3-208ENST00000412844 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
NR1I3-208ENST00000412844 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
NR1I3-208ENST00000412844 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
NR1I3-208ENST00000412844 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
NR1I3-208ENST00000412844 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
NR1I3-208ENST00000412844 MIER1Q8N108 512 aa13.56□□□□□ -0.24
NR1I3-208ENST00000412844 RTN4Q9NQC3 1192 aaKnown RBP13.54□□□□□ -0.24
NR1I3-208ENST00000412844 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
NR1I3-208ENST00000412844 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
NR1I3-208ENST00000412844 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
NR1I3-208ENST00000412844 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
NR1I3-208ENST00000412844 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
NR1I3-208ENST00000412844 PITPNM1O00562 1244 aa13.45□□□□□ -0.26
NR1I3-208ENST00000412844 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-208ENST00000412844 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms