Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 AC011471.2-201ENST00000588192 523 ntTSL 4 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF581-204ENST00000588537 1100 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 DMRTC1-202ENST00000596389 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 RPS27AP19-201ENST00000597285 458 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 C19orf54-209ENST00000598485 553 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 AL158827.2-201ENST00000602494 330 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 AC005972.2-201ENST00000604690 348 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 AL359747.1-202ENST00000606028 918 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 AL390728.4-202ENST00000606173 430 ntTSL 3 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 U2.17-201ENST00000611454 95 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 PDE4DIP-247ENST00000618504 567 ntTSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 GAGE2E-201ENST00000621907 403 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.788-201ENST00000622394 112 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 AC007546.2-201ENST00000623996 360 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 DDX41-218ENST00000625286 150 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 MIR548BB-201ENST00000626714 66 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 RIN1-208ENST00000627248 243 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC00969-286ENST00000627297 708 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 AC073488.7-201ENST00000633785 778 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 AL691447.3-201ENST00000635020 330 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 PRKAR1A-201ENST00000358598 3576 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC01483-201ENST00000433856 3085 ntTSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 PEX5L-201ENST00000263962 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 FCRL5-203ENST00000368190 2800 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 AP003469.4-201ENST00000565617 2825 ntBASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 GSTM5-203ENST00000369813 4370 ntTSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 STAG3-218ENST00000615138 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 SLC25A19-203ENST00000402418 2331 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-4Q9BYR3 LAMP3-201ENST00000265598 3375 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 GTSE1-201ENST00000454366 3112 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 RASGRP4-204ENST00000454404 3116 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 NCOA4P2-201ENST00000340589 1813 ntBASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 GRM3-203ENST00000439827 1811 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 NCALD-212ENST00000519508 1805 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 AL606534.6-201ENST00000611420 1838 ntBASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 AC100756.3-201ENST00000618455 1816 ntBASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 GGPS1-201ENST00000282841 2895 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 ENO4-201ENST00000341276 2865 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 ENO4-205ENST00000622726 2874 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 ITGA7-206ENST00000553804 3935 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 ADAM32-201ENST00000379907 2601 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 PLEKHM3-204ENST00000457206 3689 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 SLC25A19-210ENST00000580994 1554 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 AC018765.1-201ENST00000623357 3446 ntBASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 DLGAP4-213ENST00000489701 2396 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 PADI3-201ENST00000375460 3189 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 ADCY5-210ENST00000491190 3962 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 LHFPL5-201ENST00000360215 2148 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 MANBA-201ENST00000226578 2904 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 SP100-202ENST00000340126 2926 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF571-206ENST00000593133 2904 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 POLR3C-201ENST00000334163 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 RBMS3-203ENST00000383767 1864 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 AL049829.3-201ENST00000604456 1875 ntBASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 AL353583.1-201ENST00000624195 1855 ntBASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 LRRN2-202ENST00000367176 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-4Q9BYR3 ACSM2B-202ENST00000414188 2740 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms