Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 GAPDHP24-201ENST00000328713 983 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 RNA5SP46-201ENST00000362370 120 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 RNU6-244P-201ENST00000391028 104 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC008280.1-201ENST00000418851 412 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC092447.3-201ENST00000426027 686 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AL138787.1-202ENST00000437804 898 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AL133445.1-201ENST00000467051 452 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 FTH1P4-201ENST00000480365 553 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 PGBD4P4-201ENST00000509673 613 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC091163.3-201ENST00000518269 1144 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 TRMT10BP1-201ENST00000519377 943 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC008429.2-201ENST00000523057 864 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC010620.1-201ENST00000601088 1102 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 RPL12P48-201ENST00000605620 304 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC093388.1-201ENST00000609166 430 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 MIR6809-201ENST00000612189 116 ntBASIC2.03□□□□□ -2.08
HMCN1Q96RW7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 EGF-206ENST00000509793 4489 ntTSL 2 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMCN1Q96RW7 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 SNORA71.3-201ENST00000362582 128 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AJ239321.1-201ENST00000424255 564 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 GAPDHP57-201ENST00000424400 585 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 EMC3-AS1-205ENST00000438698 534 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 RN7SL172P-201ENST00000460535 303 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AC069439.1-201ENST00000494739 167 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 HAUS8P1-201ENST00000549005 542 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AC063949.1-201ENST00000552900 865 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AC113368.1-201ENST00000603736 382 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AL121655.1-201ENST00000605811 308 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AL691477.1-201ENST00000624398 162 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AC021766.1-201ENST00000624404 741 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 5S_rRNA.28-201ENST00000638107 119 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 ZNF37BP-203ENST00000452306 1352 ntBASIC2.03□□□□□ -2.09
HMCN1Q96RW7 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HMCN1Q96RW7 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC010886.1-201ENST00000437380 2869 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 PBRM1-205ENST00000409057 4980 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms