RNA–Protein interactions for RNA: ENST00000635852.1

LINC02009-201, Transcript of long intergenic non-protein coding RNA 2009, humanhuman

TSL 3 BASIC

Gene LINC02009, Length 2,951 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02009-201ENST00000635852 NISCHQ9Y2I1 1504 aa17.25■□□□□ 0.35
LINC02009-201ENST00000635852 HRCP23327 699 aa15.25■□□□□ 0.03
LINC02009-201ENST00000635852 SHROOM4Q9ULL8 1493 aa15.18■□□□□ 0.02
LINC02009-201ENST00000635852 SUPT5HO00267 1087 aaKnown RBP15.11■□□□□ 0.01
LINC02009-201ENST00000635852 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.02
LINC02009-201ENST00000635852 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
LINC02009-201ENST00000635852 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
LINC02009-201ENST00000635852 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
LINC02009-201ENST00000635852 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
LINC02009-201ENST00000635852 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
LINC02009-201ENST00000635852 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
LINC02009-201ENST00000635852 LOC105371045A0A1W2PR82 267 aa14.52□□□□□ -0.09
LINC02009-201ENST00000635852 TRIM26Q12899 539 aaPredicted RBP14.5□□□□□ -0.09
LINC02009-201ENST00000635852 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
LINC02009-201ENST00000635852 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
LINC02009-201ENST00000635852 ZEB1P37275 1124 aaPredicted RBP14.37□□□□□ -0.11
LINC02009-201ENST00000635852 DCAF8L2P0C7V8 631 aa14.31□□□□□ -0.12
LINC02009-201ENST00000635852 ACIN1Q9UKV3 1341 aaKnown RBP14.05□□□□□ -0.16
LINC02009-201ENST00000635852 MYT1Q01538 1121 aa14.02□□□□□ -0.17
LINC02009-201ENST00000635852 NEUROD1Q13562 356 aa14.01□□□□□ -0.17
LINC02009-201ENST00000635852 TRIM41Q8WV44 630 aa14□□□□□ -0.17
LINC02009-201ENST00000635852 FAM9AQ8IZU1 332 aaPredicted RBP13.97□□□□□ -0.17
LINC02009-201ENST00000635852 ABCC9O60706 1549 aa13.92□□□□□ -0.18
LINC02009-201ENST00000635852 GTF3C3Q9Y5Q9 886 aa13.92□□□□□ -0.18
LINC02009-201ENST00000635852 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
LINC02009-201ENST00000635852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
LINC02009-201ENST00000635852 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
LINC02009-201ENST00000635852 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
LINC02009-201ENST00000635852 DIEXFQ68CQ4 756 aaKnown RBP13.84□□□□□ -0.19
LINC02009-201ENST00000635852 CCER1Q8TC90 406 aaPredicted RBP13.84□□□□□ -0.19
LINC02009-201ENST00000635852 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
LINC02009-201ENST00000635852 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
LINC02009-201ENST00000635852 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
LINC02009-201ENST00000635852 YTHDC1Q96MU7 727 aaKnown RBP13.58□□□□□ -0.24
LINC02009-201ENST00000635852 TTBK1Q5TCY1 1321 aaPredicted RBP13.54□□□□□ -0.24
LINC02009-201ENST00000635852 WRNQ14191 1432 aaPredicted RBP eCLIP13.52□□□□□ -0.24
LINC02009-201ENST00000635852 MIER1Q8N108 512 aa13.5□□□□□ -0.25
LINC02009-201ENST00000635852 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
LINC02009-201ENST00000635852 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
LINC02009-201ENST00000635852 CEP162Q5TB80 1403 aa13.44□□□□□ -0.26
LINC02009-201ENST00000635852 WIZO95785 1651 aa13.41□□□□□ -0.26
LINC02009-201ENST00000635852 NACADO15069 1562 aa13.4□□□□□ -0.26
LINC02009-201ENST00000635852 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
LINC02009-201ENST00000635852 TNIKQ9UKE5 1360 aa13.37□□□□□ -0.27
LINC02009-201ENST00000635852 CCDC88BA6NC98 1476 aa13.34□□□□□ -0.27
LINC02009-201ENST00000635852 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
LINC02009-201ENST00000635852 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
LINC02009-201ENST00000635852 SOGA1O94964 1423 aa13.3□□□□□ -0.28
LINC02009-201ENST00000635852 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
LINC02009-201ENST00000635852 UBTFP17480 764 aaKnown RBP13.28□□□□□ -0.28
LINC02009-201ENST00000635852 SUPT16HQ9Y5B9 1047 aaKnown RBP13.28□□□□□ -0.28
LINC02009-201ENST00000635852 CLSPNQ9HAW4 1339 aa13.27□□□□□ -0.28
LINC02009-201ENST00000635852 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
LINC02009-201ENST00000635852 EEA1Q15075 1411 aa13.23□□□□□ -0.29
LINC02009-201ENST00000635852 RUSC2Q8N2Y8 1516 aa13.22□□□□□ -0.29
LINC02009-201ENST00000635852 TSHZ2Q9NRE2 1034 aa13.21□□□□□ -0.29
LINC02009-201ENST00000635852 ANP32EQ9BTT0 268 aa13.2□□□□□ -0.3
LINC02009-201ENST00000635852 GOLGA3Q08378 1498 aa13.19□□□□□ -0.3
LINC02009-201ENST00000635852 TOP2AP11388 1531 aaKnown RBP13.16□□□□□ -0.3
LINC02009-201ENST00000635852 SMARCA2P51531 1590 aa13.13□□□□□ -0.31
LINC02009-201ENST00000635852 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
LINC02009-201ENST00000635852 CLIP1P30622 1438 aa13.08□□□□□ -0.31
LINC02009-201ENST00000635852 VPS8Q8N3P4 1428 aa13.08□□□□□ -0.32
LINC02009-201ENST00000635852 APLP2Q06481 763 aa13.07□□□□□ -0.32
LINC02009-201ENST00000635852 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
LINC02009-201ENST00000635852 DHX57Q6P158 1386 aaKnown RBP13.06□□□□□ -0.32
LINC02009-201ENST00000635852 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
LINC02009-201ENST00000635852 KIF21BO75037 1637 aa13.02□□□□□ -0.33
LINC02009-201ENST00000635852 SMARCA4P51532 1647 aa13.02□□□□□ -0.33
LINC02009-201ENST00000635852 BCANQ96GW7 911 aa12.98□□□□□ -0.33
LINC02009-201ENST00000635852 KCNH8Q96L42 1107 aa12.97□□□□□ -0.33
LINC02009-201ENST00000635852 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
LINC02009-201ENST00000635852 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
LINC02009-201ENST00000635852 FKBP8Q14318 412 aa12.93□□□□□ -0.34
LINC02009-201ENST00000635852 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
LINC02009-201ENST00000635852 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
LINC02009-201ENST00000635852 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
LINC02009-201ENST00000635852 RBM19Q9Y4C8 960 aaKnown RBP12.9□□□□□ -0.34
LINC02009-201ENST00000635852 KANK4Q5T7N3 995 aaPredicted RBP12.87□□□□□ -0.35
LINC02009-201ENST00000635852 RRBP1Q9P2E9 1410 aaKnown RBP12.84□□□□□ -0.35
LINC02009-201ENST00000635852 CUX2O14529 1486 aa12.84□□□□□ -0.35
LINC02009-201ENST00000635852 NEFLP07196 543 aa12.82□□□□□ -0.36
LINC02009-201ENST00000635852 ARAP1Q96P48 1450 aa12.81□□□□□ -0.36
LINC02009-201ENST00000635852 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
LINC02009-201ENST00000635852 ITGAEP38570 1179 aa12.79□□□□□ -0.36
LINC02009-201ENST00000635852 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC02009-201ENST00000635852 MSH5O43196 834 aa12.78□□□□□ -0.36
LINC02009-201ENST00000635852 CCNB3Q8WWL7 1395 aa12.78□□□□□ -0.36
LINC02009-201ENST00000635852 MAPKBP1O60336 1514 aa12.76□□□□□ -0.37
LINC02009-201ENST00000635852 PPP1R15AO75807 674 aaPredicted RBP12.75□□□□□ -0.37
LINC02009-201ENST00000635852 TRIM52Q96A61 297 aa12.74□□□□□ -0.37
LINC02009-201ENST00000635852 RAB3GAP2Q9H2M9 1393 aa12.74□□□□□ -0.37
LINC02009-201ENST00000635852 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
LINC02009-201ENST00000635852 CCER2I3L3R5 266 aa12.72□□□□□ -0.37
LINC02009-201ENST00000635852 PRXQ9BXM0 1461 aa12.72□□□□□ -0.37
LINC02009-201ENST00000635852 WDR97A6NE52 1622 aa12.71□□□□□ -0.37
LINC02009-201ENST00000635852 PEG3Q9GZU2 1588 aa12.71□□□□□ -0.38
LINC02009-201ENST00000635852 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
LINC02009-201ENST00000635852 FANCIQ9NVI1 1328 aa12.69□□□□□ -0.38
LINC02009-201ENST00000635852 TOP2BQ02880 1626 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms