Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NRBF2P1-201ENST00000587407 859 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC8.82□□□□□ -1
VARS2Q5ST30 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC8.82□□□□□ -1
VARS2Q5ST30 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.82□□□□□ -1
VARS2Q5ST30 AC091953.4-201ENST00000625179 341 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 MIR193BHG-210ENST00000641327 515 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 API5P2-201ENST00000397055 1498 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 MAPK10-316ENST00000641430 2285 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 AL031985.3-201ENST00000565390 2449 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC8.81□□□□□ -1
VARS2Q5ST30 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 RNY4P34-201ENST00000364779 95 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 MXI1-204ENST00000369612 879 ntTSL 3 BASIC8.81□□□□□ -1
VARS2Q5ST30 SNORD65.1-201ENST00000390889 71 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 FTH1P3-201ENST00000394290 584 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 OR4F7P-201ENST00000402444 931 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 IGLC6-201ENST00000410078 317 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 RN7SKP247-201ENST00000411094 308 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 RPSAP59-201ENST00000421048 890 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 YBX1P8-201ENST00000421881 943 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC8.81□□□□□ -1
VARS2Q5ST30 FAM96AP1-201ENST00000430879 482 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.81□□□□□ -1
VARS2Q5ST30 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC8.81□□□□□ -1
VARS2Q5ST30 AC012181.1-201ENST00000479895 423 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 AC021733.2-201ENST00000518830 497 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 AC233290.2-201ENST00000552852 390 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC8.81□□□□□ -1
VARS2Q5ST30 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.81□□□□□ -1
VARS2Q5ST30 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.81□□□□□ -1
VARS2Q5ST30 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC8.81□□□□□ -1
VARS2Q5ST30 WDR45BP1-201ENST00000583470 1029 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 AC090699.1-201ENST00000586264 321 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 BNIP3P16-201ENST00000589779 534 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 AC125494.2-201ENST00000602431 657 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 AC104695.2-201ENST00000605056 775 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 AP005137.2-201ENST00000609238 400 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 AC018558.4-201ENST00000622153 281 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC8.81□□□□□ -1
VARS2Q5ST30 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.81□□□□□ -1
VARS2Q5ST30 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC8.81□□□□□ -1
VARS2Q5ST30 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.81□□□□□ -1
VARS2Q5ST30 AC009053.1-202ENST00000563377 2051 ntBASIC8.81□□□□□ -1
VARS2Q5ST30 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
VARS2Q5ST30 DDX11L16-201ENST00000507418 1306 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AC091132.4-201ENST00000587960 2262 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
VARS2Q5ST30 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
VARS2Q5ST30 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms