Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 ZNF304-203ENST00000443917 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 ZNF391-201ENST00000244576 4079 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 FKBP4P8-201ENST00000610931 1369 ntBASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 AC018992.1-201ENST00000523778 2149 ntBASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 ATG4C-203ENST00000371120 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 ATP8B5P-202ENST00000423138 2157 ntBASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 VOPP1-208ENST00000433959 2900 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 GBP2-201ENST00000370466 2220 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 POLR3F-201ENST00000377603 2416 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 KCNE4-201ENST00000281830 3291 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 SNX20-201ENST00000300590 3304 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-2Q9BYR7 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 CFAP65-207ENST00000441968 3416 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 ZNF155-201ENST00000270014 2596 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 PPFIBP2-208ENST00000528883 2580 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 CNDP2-209ENST00000579847 2653 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 PRAMEF11-201ENST00000619922 1845 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 ZFAT-216ENST00000523399 3734 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 SKP2-202ENST00000274255 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 KRBA1-207ENST00000496259 3763 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 C14orf159-223ENST00000522322 2856 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 SLC11A2-205ENST00000545993 1937 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 TMCO4-201ENST00000294543 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 CMTR1-201ENST00000373451 4033 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 TSPAN2-202ENST00000369516 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AC093802.1-201ENST00000407524 3238 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 P4HA3-AS1-201ENST00000502071 2157 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 PLXNA4-204ENST00000423507 3314 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AC091167.8-201ENST00000641199 3441 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 ZNF223-201ENST00000434772 2418 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 RN7SKP104-201ENST00000362605 328 ntBASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 RNU6-652P-201ENST00000365488 107 ntBASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 U2AF1L4-202ENST00000378975 747 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 RNU6-793P-201ENST00000384233 104 ntBASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 SNORD116-22-201ENST00000384430 92 ntBASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AL117342.1-201ENST00000404861 406 ntBASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 RNU6-402P-201ENST00000410678 103 ntBASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AC013248.2-201ENST00000412454 459 ntBASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AC090774.1-201ENST00000435925 246 ntBASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 GPATCH4-203ENST00000438976 1159 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 HLA-W-207ENST00000439514 771 ntBASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AL669970.2-201ENST00000446184 280 ntTSL 3 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC5.62□□□□□ -1.51
KRTAP3-2Q9BYR7 RN7SL189P-201ENST00000468631 289 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms