RNA–Protein interactions for RNA: ENST00000410678.1

RNU6-402P-201, Transcript of RNA, U6 small nuclear 402, pseudogene, humanhuman

BASIC

Gene RNU6-402P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-402P-201ENST00000410678 AEBP2Q6ZN18 517 aaPredicted RBP12.34□□□□□ -0.43
RNU6-402P-201ENST00000410678 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
RNU6-402P-201ENST00000410678 SENP3Q9H4L4 574 aaPredicted RBP10.74□□□□□ -0.69
RNU6-402P-201ENST00000410678 POTEDQ86YR6 584 aa10.59□□□□□ -0.71
RNU6-402P-201ENST00000410678 PHF23Q9BUL5 403 aaPredicted RBP10.45□□□□□ -0.74
RNU6-402P-201ENST00000410678 FOXD1Q16676 465 aa10.03□□□□□ -0.8
RNU6-402P-201ENST00000410678 MSH5O43196 834 aa9.73□□□□□ -0.85
RNU6-402P-201ENST00000410678 PIAS4Q8N2W9 510 aaPredicted RBP9.23□□□□□ -0.93
RNU6-402P-201ENST00000410678 PPP6R1Q9UPN7 881 aa8.81□□□□□ -1
RNU6-402P-201ENST00000410678 ADRA2BP18089 450 aa8.75□□□□□ -1.01
RNU6-402P-201ENST00000410678 CACNB1Q02641 598 aaPredicted RBP8.74□□□□□ -1.01
RNU6-402P-201ENST00000410678 PLPPR3Q6T4P5 718 aa8.61□□□□□ -1.03
RNU6-402P-201ENST00000410678 DMRT2Q9Y5R5 561 aa8.39□□□□□ -1.07
RNU6-402P-201ENST00000410678 MAPK8IP2Q13387 824 aaPredicted RBP8.23□□□□□ -1.09
RNU6-402P-201ENST00000410678 RNF39Q9H2S5 420 aa8.2□□□□□ -1.1
RNU6-402P-201ENST00000410678 POTEHQ6S545 545 aa8.19□□□□□ -1.1
RNU6-402P-201ENST00000410678 SCAF1Q9H7N4 1312 aaKnown RBP8.13□□□□□ -1.11
RNU6-402P-201ENST00000410678 C1QBPQ07021 282 aaKnown RBP8.08□□□□□ -1.12
RNU6-402P-201ENST00000410678 DCAF8L1A6NGE4 600 aa8.07□□□□□ -1.12
RNU6-402P-201ENST00000410678 HOXD11P31277 338 aaPredicted RBP7.8□□□□□ -1.16
RNU6-402P-201ENST00000410678 DNAJC5BQ9UF47 199 aa7.73□□□□□ -1.17
RNU6-402P-201ENST00000410678 RNF216Q9NWF9 866 aaPredicted RBP7.57□□□□□ -1.2
RNU6-402P-201ENST00000410678 CNKSR2Q8WXI2 1034 aa7.47□□□□□ -1.21
RNU6-402P-201ENST00000410678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.46□□□□□ -1.22
RNU6-402P-201ENST00000410678 DSG3P32926 999 aa7.43□□□□□ -1.22
RNU6-402P-201ENST00000410678 PPP4R3CPQ6ZMV5 832 aa7.41□□□□□ -1.22
RNU6-402P-201ENST00000410678 SP7Q8TDD2 431 aaPredicted RBP7.36□□□□□ -1.23
RNU6-402P-201ENST00000410678 CAPN15O75808 1086 aa7.33□□□□□ -1.24
RNU6-402P-201ENST00000410678 CHRDL2Q6WN34 429 aa7.26□□□□□ -1.25
RNU6-402P-201ENST00000410678 SPINK5Q9NQ38 1064 aaPredicted RBP7.26□□□□□ -1.25
RNU6-402P-201ENST00000410678 RBM42Q9BTD8 480 aaKnown RBP7.19□□□□□ -1.26
RNU6-402P-201ENST00000410678 U3KPZ7 1027 aaPredicted RBP7.18□□□□□ -1.26
RNU6-402P-201ENST00000410678 ABCB7O75027 752 aa7.06□□□□□ -1.28
RNU6-402P-201ENST00000410678 ZNF219Q9P2Y4 722 aaPredicted RBP7.05□□□□□ -1.28
RNU6-402P-201ENST00000410678 TRHP20396 242 aaPredicted RBP7.03□□□□□ -1.28
RNU6-402P-201ENST00000410678 APLP2Q06481 763 aa7.03□□□□□ -1.28
RNU6-402P-201ENST00000410678 PLSCR2Q9NRY7 297 aa7.03□□□□□ -1.28
RNU6-402P-201ENST00000410678 NCBP3Q53F19 620 aaKnown RBP7□□□□□ -1.29
RNU6-402P-201ENST00000410678 HAX1O00165 279 aa6.99□□□□□ -1.29
RNU6-402P-201ENST00000410678 PIP4P2Q8N4L2 257 aa6.91□□□□□ -1.3
RNU6-402P-201ENST00000410678 LHX8Q68G74 356 aa6.88□□□□□ -1.31
RNU6-402P-201ENST00000410678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.84□□□□□ -1.31
RNU6-402P-201ENST00000410678 HNRNPUL2Q1KMD3 747 aaKnown RBP6.84□□□□□ -1.31
RNU6-402P-201ENST00000410678 AKT1S1Q96B36 256 aa6.84□□□□□ -1.31
RNU6-402P-201ENST00000410678 NPM3O75607 178 aaKnown RBP6.82□□□□□ -1.32
RNU6-402P-201ENST00000410678 EVX2Q03828 476 aa6.77□□□□□ -1.33
RNU6-402P-201ENST00000410678 FXR2P51116 673 aaKnown RBP eCLIP6.76□□□□□ -1.33
RNU6-402P-201ENST00000410678 SAMD1Q6SPF0 538 aaPredicted RBP6.75□□□□□ -1.33
RNU6-402P-201ENST00000410678 REM2Q8IYK8 340 aaPredicted RBP6.75□□□□□ -1.33
RNU6-402P-201ENST00000410678 POLA2Q14181 598 aa6.69□□□□□ -1.34
RNU6-402P-201ENST00000410678 PITPNM1O00562 1244 aa6.68□□□□□ -1.34
RNU6-402P-201ENST00000410678 SLC4A2P04920 1241 aa6.66□□□□□ -1.34
RNU6-402P-201ENST00000410678 GABBR2O75899 941 aa6.63□□□□□ -1.35
RNU6-402P-201ENST00000410678 ZBTB12Q9Y330 459 aaPredicted RBP6.59□□□□□ -1.35
RNU6-402P-201ENST00000410678 C19orf67A6NJJ6 358 aa6.58□□□□□ -1.36
RNU6-402P-201ENST00000410678 PCDH10Q9P2E7 1040 aa6.53□□□□□ -1.36
RNU6-402P-201ENST00000410678 POTEMA6NI47 508 aa6.51□□□□□ -1.37
RNU6-402P-201ENST00000410678 PRKAR2AP13861 404 aaKnown RBP6.5□□□□□ -1.37
RNU6-402P-201ENST00000410678 OSCARQ8IYS5 282 aa6.49□□□□□ -1.37
RNU6-402P-201ENST00000410678 POTEGQ6S5H5 508 aa6.48□□□□□ -1.37
RNU6-402P-201ENST00000410678 POTEIP0CG38 1075 aa6.45□□□□□ -1.38
RNU6-402P-201ENST00000410678 CLCN6P51797 869 aa6.4□□□□□ -1.38
RNU6-402P-201ENST00000410678 MYCNP04198 464 aaPredicted RBP6.36□□□□□ -1.39
RNU6-402P-201ENST00000410678 OTUD5Q96G74 571 aa6.36□□□□□ -1.39
RNU6-402P-201ENST00000410678 DCBLD2Q96PD2 775 aa6.36□□□□□ -1.39
RNU6-402P-201ENST00000410678 SPDYE1Q8NFV5 336 aaPredicted RBP6.35□□□□□ -1.39
RNU6-402P-201ENST00000410678 CLEC11AQ9Y240 323 aa6.33□□□□□ -1.4
RNU6-402P-201ENST00000410678 SPDYE2BA6NHP3 402 aa6.29□□□□□ -1.4
RNU6-402P-201ENST00000410678 SPDYE6P0CI01 402 aa6.29□□□□□ -1.4
RNU6-402P-201ENST00000410678 SPDYE2Q495Y8 402 aa6.29□□□□□ -1.4
RNU6-402P-201ENST00000410678 CD44P16070 742 aaKnown RBP6.27□□□□□ -1.41
RNU6-402P-201ENST00000410678 CHADLQ6NUI6 762 aa6.24□□□□□ -1.41
RNU6-402P-201ENST00000410678 POTEB2H3BUK9 544 aa6.21□□□□□ -1.42
RNU6-402P-201ENST00000410678 ATF5Q9Y2D1 282 aaPredicted RBP6.18□□□□□ -1.42
RNU6-402P-201ENST00000410678 PRR29P0C7W0 189 aa6.15□□□□□ -1.42
RNU6-402P-201ENST00000410678 ZNF579Q8NAF0 562 aaKnown RBP6.15□□□□□ -1.42
RNU6-402P-201ENST00000410678 MAMSTRQ6ZN01 415 aa6.14□□□□□ -1.43
RNU6-402P-201ENST00000410678 LCE2DQ5TA82 110 aaPredicted RBP6.13□□□□□ -1.43
RNU6-402P-201ENST00000410678 FAM163AQ96GL9 167 aaPredicted RBP6.13□□□□□ -1.43
RNU6-402P-201ENST00000410678 FARP1Q9Y4F1 1045 aaPredicted RBP6.13□□□□□ -1.43
RNU6-402P-201ENST00000410678 FBLN2P98095 1184 aa6.11□□□□□ -1.43
RNU6-402P-201ENST00000410678 CDAN1Q8IWY9 1227 aa6.09□□□□□ -1.43
RNU6-402P-201ENST00000410678 SSUH2Q9Y2M2 353 aa6.09□□□□□ -1.43
RNU6-402P-201ENST00000410678 GALR2O43603 387 aaPredicted RBP6.08□□□□□ -1.44
RNU6-402P-201ENST00000410678 ZNF692Q9BU19 519 aaPredicted RBP6.08□□□□□ -1.44
RNU6-402P-201ENST00000410678 ZRANB1Q9UGI0 708 aa6.06□□□□□ -1.44
RNU6-402P-201ENST00000410678 KCNA4P22459 653 aa6.05□□□□□ -1.44
RNU6-402P-201ENST00000410678 SCUBE2Q9NQ36 999 aa6.04□□□□□ -1.44
RNU6-402P-201ENST00000410678 C7P10643 843 aa6.02□□□□□ -1.45
RNU6-402P-201ENST00000410678 MMRN1Q13201 1228 aa6.02□□□□□ -1.45
RNU6-402P-201ENST00000410678 METRNQ9UJH8 293 aa6.02□□□□□ -1.45
RNU6-402P-201ENST00000410678 POTEJP0CG39 1038 aa6.01□□□□□ -1.45
RNU6-402P-201ENST00000410678 PELP1Q8IZL8 1130 aaKnown RBP6□□□□□ -1.45
RNU6-402P-201ENST00000410678 SLC39A7Q92504 469 aa6□□□□□ -1.45
RNU6-402P-201ENST00000410678 PABPN1Q86U42 306 aaKnown RBP eCLIP5.95□□□□□ -1.46
RNU6-402P-201ENST00000410678 SPNS2Q8IVW8 549 aa5.95□□□□□ -1.46
RNU6-402P-201ENST00000410678 ASTLQ6HA08 431 aaPredicted RBP5.94□□□□□ -1.46
RNU6-402P-201ENST00000410678 PAK3O75914 559 aaPredicted RBP5.93□□□□□ -1.46
RNU6-402P-201ENST00000410678 FOXD4L1Q9NU39 408 aa5.91□□□□□ -1.46
RNU6-402P-201ENST00000410678 ATMINO43313 823 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms