Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
COL5A2P05997 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
COL5A2P05997 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 RNA5SP305-201ENST00000362665 119 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
COL5A2P05997 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 AL139128.1-201ENST00000413921 941 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.49□□□□□ -1.21
COL5A2P05997 PA2G4P6-201ENST00000438325 1197 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 AC092106.1-201ENST00000444291 373 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 AL035690.1-201ENST00000490892 383 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 AC078878.1-201ENST00000539832 958 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 AC106730.2-201ENST00000566641 540 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 AC006116.3-201ENST00000592968 361 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 AC090607.5-201ENST00000615692 224 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 AC100827.5-201ENST00000615883 426 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
COL5A2P05997 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 RNU4-2-201ENST00000365668 141 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.49□□□□□ -1.21
COL5A2P05997 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.49□□□□□ -1.21
COL5A2P05997 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.49□□□□□ -1.21
COL5A2P05997 IGLV3-24-201ENST00000517477 197 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 AP001922.4-201ENST00000526967 290 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 NMNAT1P5-201ENST00000559657 841 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 MIR4311-201ENST00000580794 100 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 AC011840.5-201ENST00000582125 771 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 ELOCP28-201ENST00000590044 317 ntBASIC7.49□□□□□ -1.21
COL5A2P05997 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.49□□□□□ -1.21
COL5A2P05997 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL5A2P05997 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
COL5A2P05997 DUTP5-201ENST00000406790 469 ntBASIC7.48□□□□□ -1.21
COL5A2P05997 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.48□□□□□ -1.21
COL5A2P05997 AC096775.1-201ENST00000437724 448 ntBASIC7.48□□□□□ -1.21
COL5A2P05997 AL772161.1-201ENST00000439130 476 ntBASIC7.48□□□□□ -1.21
COL5A2P05997 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.48□□□□□ -1.21
COL5A2P05997 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.48□□□□□ -1.21
COL5A2P05997 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.48□□□□□ -1.21
COL5A2P05997 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.48□□□□□ -1.21
COL5A2P05997 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.48□□□□□ -1.21
COL5A2P05997 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
COL5A2P05997 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.48□□□□□ -1.21
COL5A2P05997 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.48□□□□□ -1.21
COL5A2P05997 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL5A2P05997 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
COL5A2P05997 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL5A2P05997 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL5A2P05997 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL5A2P05997 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.47□□□□□ -1.21
COL5A2P05997 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.47□□□□□ -1.21
COL5A2P05997 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
COL5A2P05997 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms