RNA–Protein interactions for RNA: ENST00000392842.5

RFX4-203, Transcript of regulatory factor X4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX4, Length 3,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-203ENST00000392842 NISCHQ9Y2I1 1504 aa12.68□□□□□ -0.38
RFX4-203ENST00000392842 DCAF8L2P0C7V8 631 aa11.9□□□□□ -0.5
RFX4-203ENST00000392842 ABCC9O60706 1549 aa11.22□□□□□ -0.61
RFX4-203ENST00000392842 SHROOM4Q9ULL8 1493 aa11.21□□□□□ -0.62
RFX4-203ENST00000392842 SUPT5HO00267 1087 aaKnown RBP10.87□□□□□ -0.67
RFX4-203ENST00000392842 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
RFX4-203ENST00000392842 CCDC180Q9P1Z9 1646 aa10.69□□□□□ -0.7
RFX4-203ENST00000392842 ZCCHC6Q5VYS8 1495 aaKnown RBP10.51□□□□□ -0.73
RFX4-203ENST00000392842 SCRIBQ14160 1630 aa10.46□□□□□ -0.74
RFX4-203ENST00000392842 EHMT2Q96KQ7 1210 aa10.39□□□□□ -0.75
RFX4-203ENST00000392842 RB1CC1Q8TDY2 1594 aa10.36□□□□□ -0.75
RFX4-203ENST00000392842 NACADO15069 1562 aa10.29□□□□□ -0.76
RFX4-203ENST00000392842 PCGF6Q9BYE7 350 aa10.23□□□□□ -0.77
RFX4-203ENST00000392842 FAM9AQ8IZU1 332 aaPredicted RBP10.2□□□□□ -0.78
RFX4-203ENST00000392842 CECR2Q9BXF3 1484 aa10.12□□□□□ -0.79
RFX4-203ENST00000392842 DNAJC5BQ9UF47 199 aa10.1□□□□□ -0.79
RFX4-203ENST00000392842 DCAF1Q9Y4B6 1507 aa10.09□□□□□ -0.79
RFX4-203ENST00000392842 RANGAP1P46060 587 aaPredicted RBP10.04□□□□□ -0.8
RFX4-203ENST00000392842 TTBK1Q5TCY1 1321 aaPredicted RBP10.02□□□□□ -0.81
RFX4-203ENST00000392842 TRIM41Q8WV44 630 aa10.01□□□□□ -0.81
RFX4-203ENST00000392842 MYO15BQ96JP2 1530 aa9.97□□□□□ -0.81
RFX4-203ENST00000392842 CHIC1Q5VXU3 224 aa9.96□□□□□ -0.82
RFX4-203ENST00000392842 RSF1Q96T23 1441 aaPredicted RBP9.95□□□□□ -0.82
RFX4-203ENST00000392842 LOC105371045A0A1W2PR82 267 aa9.94□□□□□ -0.82
RFX4-203ENST00000392842 MROH2BQ7Z745 1585 aa9.92□□□□□ -0.82
RFX4-203ENST00000392842 PPARGC1BQ86YN6 1023 aaKnown RBP9.88□□□□□ -0.83
RFX4-203ENST00000392842 BICRAQ9NZM4 1560 aa9.86□□□□□ -0.83
RFX4-203ENST00000392842 BAZ1BQ9UIG0 1483 aaKnown RBP9.86□□□□□ -0.83
RFX4-203ENST00000392842 APLP2Q06481 763 aa9.84□□□□□ -0.83
RFX4-203ENST00000392842 FBLN2P98095 1184 aa9.84□□□□□ -0.83
RFX4-203ENST00000392842 HRCP23327 699 aa9.82□□□□□ -0.84
RFX4-203ENST00000392842 BAZ1AQ9NRL2 1556 aaPredicted RBP9.82□□□□□ -0.84
RFX4-203ENST00000392842 CCER1Q8TC90 406 aaPredicted RBP9.8□□□□□ -0.84
RFX4-203ENST00000392842 EIF4G1Q04637 1599 aaKnown RBP9.78□□□□□ -0.84
RFX4-203ENST00000392842 UBTFP17480 764 aaKnown RBP9.77□□□□□ -0.84
RFX4-203ENST00000392842 ATAD2BQ9ULI0 1458 aa9.77□□□□□ -0.85
RFX4-203ENST00000392842 WIZO95785 1651 aa9.77□□□□□ -0.85
RFX4-203ENST00000392842 TRIM26Q12899 539 aaPredicted RBP9.77□□□□□ -0.85
RFX4-203ENST00000392842 ATP1B4Q9UN42 357 aaPredicted RBP9.75□□□□□ -0.85
RFX4-203ENST00000392842 UNC13AQ9UPW8 1703 aa9.75□□□□□ -0.85
RFX4-203ENST00000392842 ZEB1P37275 1124 aaPredicted RBP9.75□□□□□ -0.85
RFX4-203ENST00000392842 CC2D2AQ9P2K1 1620 aa9.72□□□□□ -0.85
RFX4-203ENST00000392842 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
RFX4-203ENST00000392842 SMARCA4P51532 1647 aa9.71□□□□□ -0.86
RFX4-203ENST00000392842 CCDC88BA6NC98 1476 aa9.68□□□□□ -0.86
RFX4-203ENST00000392842 SMARCA2P51531 1590 aa9.66□□□□□ -0.86
RFX4-203ENST00000392842 NESP48681 1621 aa9.65□□□□□ -0.87
RFX4-203ENST00000392842 NCAPD3P42695 1498 aa9.6□□□□□ -0.87
RFX4-203ENST00000392842 CADPSQ9ULU8 1353 aa9.6□□□□□ -0.87
RFX4-203ENST00000392842 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
RFX4-203ENST00000392842 P3H3Q8IVL6 736 aa9.6□□□□□ -0.87
RFX4-203ENST00000392842 CENPBP07199 599 aaPredicted RBP9.58□□□□□ -0.88
RFX4-203ENST00000392842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.57□□□□□ -0.88
RFX4-203ENST00000392842 HNRNPUL2Q1KMD3 747 aaKnown RBP9.57□□□□□ -0.88
RFX4-203ENST00000392842 YTHDC1Q96MU7 727 aaKnown RBP9.57□□□□□ -0.88
RFX4-203ENST00000392842 TOP2AP11388 1531 aaKnown RBP9.54□□□□□ -0.88
RFX4-203ENST00000392842 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
RFX4-203ENST00000392842 TDRD9Q8NDG6 1382 aaKnown RBP9.53□□□□□ -0.88
RFX4-203ENST00000392842 ABCC8Q09428 1581 aa9.53□□□□□ -0.88
RFX4-203ENST00000392842 CHMP7Q8WUX9 453 aaPredicted RBP9.53□□□□□ -0.88
RFX4-203ENST00000392842 WRNQ14191 1432 aaPredicted RBP eCLIP9.51□□□□□ -0.89
RFX4-203ENST00000392842 CSRNP3Q8WYN3 585 aa9.51□□□□□ -0.89
RFX4-203ENST00000392842 PELP1Q8IZL8 1130 aaKnown RBP9.5□□□□□ -0.89
RFX4-203ENST00000392842 FANCD2Q9BXW9 1451 aa9.49□□□□□ -0.89
RFX4-203ENST00000392842 ITGAEP38570 1179 aa9.47□□□□□ -0.89
RFX4-203ENST00000392842 CEP164Q9UPV0 1460 aa9.44□□□□□ -0.9
RFX4-203ENST00000392842 SOGA1O94964 1423 aa9.42□□□□□ -0.9
RFX4-203ENST00000392842 RAD54L2Q9Y4B4 1467 aa9.4□□□□□ -0.9
RFX4-203ENST00000392842 CUX2O14529 1486 aa9.4□□□□□ -0.9
RFX4-203ENST00000392842 HMGXB3Q12766 1538 aa9.39□□□□□ -0.91
RFX4-203ENST00000392842 CFTRP13569 1480 aa9.38□□□□□ -0.91
RFX4-203ENST00000392842 DIEXFQ68CQ4 756 aaKnown RBP9.38□□□□□ -0.91
RFX4-203ENST00000392842 AQRO60306 1485 aaKnown RBP eCLIP9.37□□□□□ -0.91
RFX4-203ENST00000392842 RUSC2Q8N2Y8 1516 aa9.34□□□□□ -0.91
RFX4-203ENST00000392842 MYT1LQ9UL68 1186 aa9.34□□□□□ -0.91
RFX4-203ENST00000392842 KIF27Q86VH2 1401 aa9.32□□□□□ -0.92
RFX4-203ENST00000392842 FGD5Q6ZNL6 1462 aa9.31□□□□□ -0.92
RFX4-203ENST00000392842 PEG3Q9GZU2 1588 aa9.29□□□□□ -0.92
RFX4-203ENST00000392842 CARMIL1Q5VZK9 1371 aa9.29□□□□□ -0.92
RFX4-203ENST00000392842 CYB5RLQ6IPT4 315 aa9.28□□□□□ -0.92
RFX4-203ENST00000392842 KCNH8Q96L42 1107 aa9.27□□□□□ -0.93
RFX4-203ENST00000392842 MRC2Q9UBG0 1479 aa9.27□□□□□ -0.93
RFX4-203ENST00000392842 OSCARQ8IYS5 282 aa9.25□□□□□ -0.93
RFX4-203ENST00000392842 TOPBP1Q92547 1522 aa9.25□□□□□ -0.93
RFX4-203ENST00000392842 URB2Q14146 1524 aaKnown RBP9.24□□□□□ -0.93
RFX4-203ENST00000392842 TRHP20396 242 aaPredicted RBP9.23□□□□□ -0.93
RFX4-203ENST00000392842 CUX1P39880 1505 aa9.23□□□□□ -0.93
RFX4-203ENST00000392842 ZNF608Q9ULD9 1512 aaPredicted RBP9.23□□□□□ -0.93
RFX4-203ENST00000392842 POLA1P09884 1462 aaPredicted RBP9.23□□□□□ -0.93
RFX4-203ENST00000392842 NPM1P06748 294 aaKnown RBP eCLIP9.23□□□□□ -0.93
RFX4-203ENST00000392842 NEFLP07196 543 aa9.23□□□□□ -0.93
RFX4-203ENST00000392842 ZNF777Q9ULD5 760 aaPredicted RBP9.23□□□□□ -0.93
RFX4-203ENST00000392842 LAMC3Q9Y6N6 1575 aa9.22□□□□□ -0.93
RFX4-203ENST00000392842 GTF3C3Q9Y5Q9 886 aa9.22□□□□□ -0.93
RFX4-203ENST00000392842 SYNJ1O43426 1573 aa9.22□□□□□ -0.93
RFX4-203ENST00000392842 JPH4Q96JJ6 628 aa9.21□□□□□ -0.94
RFX4-203ENST00000392842 FAM50AQ14320 339 aaKnown RBP9.2□□□□□ -0.94
RFX4-203ENST00000392842 GAPVD1Q14C86 1478 aa9.2□□□□□ -0.94
RFX4-203ENST00000392842 IGF1RP08069 1367 aa9.2□□□□□ -0.94
RFX4-203ENST00000392842 CNGB1Q14028 1251 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 240.3 ms